RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 TM4SF20Q53R12 229 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 METRNLQ641Q3 311 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 CYB5D1Q6P9G0 228 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 WASH2PQ6VEQ5 465 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 CXXC5Q7LFL8 322 aaKnown RBP8□□□□□ -1.13
DNMT1-219ENST00000589349 ARHGAP22Q7Z5H3 698 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 SERPINA9Q86WD7 417 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 SLC13A5Q86YT5 568 aaPredicted RBP8□□□□□ -1.13
DNMT1-219ENST00000589349 REXO1L1PQ8IX06 675 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 NXPE1Q8N323 547 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 PPHLN1Q8NEY8 458 aaKnown RBP8□□□□□ -1.13
DNMT1-219ENST00000589349 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 GPR150Q8NGU9 434 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 OR2L2Q8NH16 312 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 GSDMBQ8TAX9 411 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 STYXQ8WUJ0 223 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 SKA2Q8WVK7 121 aaPredicted RBP8□□□□□ -1.13
DNMT1-219ENST00000589349 LCN9Q8WX39 176 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 ELMO1Q92556 727 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 RTP4Q96DX8 246 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 MFSD3Q96ES6 412 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 NUDT11Q96G61 164 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 HES6Q96HZ4 224 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 ZPBPQ9BS86 351 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 CCM2Q9BSQ5 444 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 SRMSQ9H3Y6 488 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 UCK1Q9HA47 277 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 PDE7BQ9NP56 450 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 WASH6PQ9NQA3 447 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 TDRKHQ9Y2W6 561 aaKnown RBP8□□□□□ -1.13
DNMT1-219ENST00000589349 HEBP2Q9Y5Z4 205 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 ZFHX4Q86UP3 3567 aa8□□□□□ -1.13
DNMT1-219ENST00000589349 OR51F1A6NGY5 319 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ZNF891A8MT65 544 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 F8W8V4 182 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 MAST4O15021 2626 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 LIASO43766 372 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 KIAA0754O94854 1291 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 AP2A1O95782 977 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ZSCAN5DPP0CG00 497 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 TCN2P20062 427 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 POU3F2P20265 443 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 MSNP26038 577 aaKnown RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ACRV1P26436 265 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CXCR5P32302 372 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 DLSTP36957 453 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CAPZBP47756 277 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 VPS41P49754 854 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ZNF140P52738 457 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 PPP1CAP62136 330 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CDH17Q12864 832 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 TUBB3Q13509 450 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 LAMB3Q13751 1172 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 BOP1Q14137 746 aaKnown RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 GPR33Q49SQ1 333 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 FASTKD1Q53R41 847 aaKnown RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 TMTC4Q5T4D3 741 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CASC4Q6P4E1 433 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 NAPRTQ6XQN6 538 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 MICALCLQ6ZW33 695 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 C11orf96Q7Z7L8 435 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 PPP1R3BQ86XI6 285 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 KIF18BQ86Y91 864 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ZNF843Q8N446 348 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ESX1Q8N693 406 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 LILRA3Q8N6C8 439 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CLDN19Q8N6F1 224 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CFAP61Q8NHU2 1237 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 SLC35B2Q8TB61 432 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 HM13Q8TCT9 377 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 MAIP1Q8WWC4 291 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 HDAC10Q969S8 669 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 CDKN2AIPNLQ96HQ2 116 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 MAP3K3Q99759 626 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 HGH1Q9BTY7 390 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 EFHD1Q9BUP0 239 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 BTBD2Q9BX70 525 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 FRMD8P1Q9BZ68 369 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 FANCEQ9HB96 536 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ACSS2Q9NR19 701 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 FBXO8Q9NRD0 319 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 NLE1Q9NVX2 485 aaPredicted RBP7.99□□□□□ -1.13
DNMT1-219ENST00000589349 SMOXQ9NWM0 555 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 OGFRQ9NZT2 677 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 PAK5Q9P286 719 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 RARRES3Q9UL19 164 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 ZKSCAN5Q9Y2L8 839 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 PCDHGA3Q9Y5H0 932 aa7.99□□□□□ -1.13
DNMT1-219ENST00000589349 PIPSLA2A3N6 862 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 HEATR9A2RTY3 570 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 CCDC162PA2VCL2 907 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 KLHL33A6NCF5 533 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 GAPDHSO14556 408 aaPredicted RBP7.98□□□□□ -1.13
DNMT1-219ENST00000589349 NKX2-8O15522 239 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 LDB2O43679 373 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 SLC28A2O43868 658 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 FGGP02679 453 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 FTH1P02794 183 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 OR56A5P0C7T3 313 aa7.98□□□□□ -1.13
DNMT1-219ENST00000589349 EBLN1P0CF75 366 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms