RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 MAMDC2Q7Z304 686 aaPredicted RBP20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 SDCCAG8Q86SQ7 713 aaPredicted RBP20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 CILP2Q8IUL8 1156 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 MIEF2Q96C03 454 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 FOPNLQ96NB1 174 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 OR2A5Q96R48 311 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 C3orf18Q9UK00 162 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 NXT1Q9UKK6 140 aaKnown RBP20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 RUVBL1Q9Y265 456 aaKnown RBP20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 SLC5A6Q9Y289 635 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 ZKSCAN5Q9Y2L8 839 aa20.32■□□□□ 0.84
NEDD4L-225ENST00000589054 FOXS1O43638 330 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 KLHL41O60662 606 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 SYT16Q17RD7 645 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 ANKRD20A4Q4UJ75 823 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 NEPROQ6NW34 567 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 C4orf22Q6V702 233 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 CYHR1Q6ZMK1 362 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 ZNF662Q6ZS27 426 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 DENND6AQ8IWF6 608 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 REXO1L1PQ8IX06 675 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 LRRC56Q8IYG6 542 aaPredicted RBP20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 AMER3Q8N944 861 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 CNDP1Q96KN2 507 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 TCF12Q99081 682 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 ZNF282Q9UDV7 671 aaPredicted RBP20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 TAC3Q9UHF0 121 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 MRPS2Q9Y399 296 aaKnown RBP20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 FAM169AQ9Y6X4 670 aa20.31■□□□□ 0.84
NEDD4L-225ENST00000589054 P2RX6O15547 441 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 SLC16A8O95907 504 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 HPP00738 406 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 STATHP02808 62 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 COX6A1P12074 109 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 OGNP20774 298 aaKnown RBP20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 CMPK1P30085 196 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 DCTP40126 519 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 TSFMP43897 325 aaKnown RBP20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 CDK16Q00536 496 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 GPS1Q13098 491 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 CTBP1Q13363 440 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 CUL1Q13616 776 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 ZNF169Q14929 603 aaPredicted RBP20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 PRMT9Q6P2P2 845 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 PLD3Q8IV08 490 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 ST6GALNAC3Q8NDV1 305 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 ZNF480Q8WV37 535 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 SMPDL3AQ92484 453 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 MRPS30Q9NP92 439 aaKnown RBP20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 PLA2G3Q9NZ20 509 aa20.3■□□□□ 0.84
NEDD4L-225ENST00000589054 CRYBG3Q68DQ2 2970 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 ZCWPW2A0A1B0GU75 182 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 E7ENX8 843 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 ACPPP15309 386 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 FBLP22087 321 aaKnown RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 PNLIPRP1P54315 467 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 TAP2Q03519 686 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 OCA2Q04671 838 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 SRSF11Q05519 484 aaKnown RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 PRDX1Q06830 199 aaKnown RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 TSTA3Q13630 321 aaPredicted RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 MUM1Q2TAK8 710 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 ICE2Q659A1 982 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 FAAH2Q6GMR7 532 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 ISLR2Q6UXK2 745 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 RAB42Q8N4Z0 105 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 CSNK1A1LQ8N752 337 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 MAGEC3Q8TD91 643 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 CABS1Q96KC9 395 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 FBXO6Q9NRD1 293 aaPredicted RBP20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 NEU2Q9Y3R4 380 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 MRFAP1Q9Y605 127 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 CACNA1DQ01668 2161 aa20.29■□□□□ 0.84
NEDD4L-225ENST00000589054 H3BMM5 538 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 AP3B1O00203 1094 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 RPA3P35244 121 aaPredicted RBP20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 SOX11P35716 441 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 SLC26A3P40879 764 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 EEF1A2Q05639 463 aaKnown RBP20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 CDC16Q13042 620 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 MFAP5Q13361 173 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 RNF187Q5TA31 235 aaPredicted RBP20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 BRIX1Q8TDN6 353 aaKnown RBP20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 FAR1Q8WVX9 515 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 ASB11Q8WXH4 323 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 MS4A14Q96JA4 679 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 C5orf34Q96MH7 638 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 ABCF3Q9NUQ8 709 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 TRPC4Q9UBN4 977 aa20.28■□□□□ 0.84
NEDD4L-225ENST00000589054 CROCCQ5TZA2 2017 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 FAM237BA0A1B0GVD1 139 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 IDSB3KWA1 339 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 GOLGA8MH3BSY2 632 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 HAT1O14929 419 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 USP1O94782 785 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 F10P00742 488 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 KRT14P02533 472 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 PRR35P0CG20 571 aa20.27■□□□□ 0.84
NEDD4L-225ENST00000589054 CARSP49589 748 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms