RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 DNMT3AQ9Y6K1 912 aaPredicted RBP6.4□□□□□ -1.38
TPM4-210ENST00000588507 COL7A1Q02388 2944 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 TRGV5A0A0B4J1U4 118 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 ARHGAP42A6NI28 874 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 POM121CA8CG34 1229 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 H3BRJ5 948 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 CDC7O00311 574 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 FOXN3O00409 490 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 SNPHO15079 494 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 HCN1O60741 890 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 LETM1O95202 739 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 MT-CYBP00156 380 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 PLAUP00749 431 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 SOD3P08294 240 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 SLC35G4P0C7Q5 338 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 PTPN9P43378 593 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 KCNC1P48547 511 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 PAPOLAP51003 745 aaKnown RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 NUDT6P53370 316 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 PCDH1Q08174 1060 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 SCGB2A2Q13296 93 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 SLC10A1Q14973 349 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 KHDC1Q4VXA5 237 aaKnown RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 PDPK2PQ6A1A2 396 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 DNAJC14Q6Y2X3 702 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 USP43Q70EL4 1123 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 SLC26A11Q86WA9 606 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 ZDHHC17Q8IUH5 632 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 WDTC1Q8N5D0 677 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 TRAM1L1Q8N609 369 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 C1orf131Q8NDD1 294 aaKnown RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 CCHCR1Q8TD31 782 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 ZNF606Q8WXB4 792 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 TTC25Q96NG3 672 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 BTBD9Q96Q07 612 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 FERD3LQ96RJ6 166 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 NRTNQ99748 197 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 NUP85Q9BW27 656 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 TTTY12Q9BZ98 90 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 TGIF2Q9GZN2 237 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 XKR8Q9H6D3 395 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 SYNCQ9H7C4 482 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 METTL17Q9H7H0 456 aaPredicted RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 MANSC1Q9H8J5 431 aa6.39□□□□□ -1.39
TPM4-210ENST00000588507 METTL14Q9HCE5 456 aaKnown RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
TPM4-210ENST00000588507 DRG1Q9Y295 367 aaKnown RBP6.39□□□□□ -1.39
TPM4-210ENST00000588507 ATP6AP2A0A1C7CYW4 349 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PINLYPA6NC86 204 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 FCHO1O14526 889 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 FFAR3O14843 346 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 SMAD9O15198 467 aaKnown RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 GPR42O15529 346 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PRPF4O43172 522 aaKnown RBP eCLIP6.38□□□□□ -1.392e-10■■□□□ 13.2
TPM4-210ENST00000588507 FZD6O60353 706 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 ATP6AP2O75787 350 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 TUBB4AP04350 444 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 NR2F2P24468 414 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 GCH1P30793 250 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 HSPA9P38646 679 aaKnown RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 MAGEA5P43359 124 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 NRF1Q16656 503 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CBWD6Q4V339 395 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 ANKRD20A8PQ5CZ79 823 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 BEX5Q5H9J7 111 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CBWD3Q5JTY5 395 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CBWD5Q5RIA9 395 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 ALS2CLQ60I27 953 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 SARM1Q6SZW1 724 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 MDGA2Q7Z553 956 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CYP4Z2PQ8N1L4 340 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 TMEM251Q8N6I4 163 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PDILTQ8N807 584 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 OR2M7Q8NG81 312 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 OR52E1Q8NGJ3 308 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 AKAP1Q92667 903 aaKnown RBP eCLIP6.38□□□□□ -1.39
TPM4-210ENST00000588507 KAT5Q92993 513 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 ZC3HAV1LQ96H79 300 aaKnown RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 RBM41Q96IZ5 413 aaKnown RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 CCT8L2Q96SF2 557 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CYTH2Q99418 400 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 C7orf25Q9BPX7 421 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 C11orf70Q9BRQ4 267 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 TUBGCP2Q9BSJ2 902 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 SLC39A8Q9C0K1 460 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 MKKSQ9NPJ1 570 aaPredicted RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 ENAMQ9NRM1 1142 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 DEPPQ9NTK1 212 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 SPHK1Q9NYA1 384 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 SPRR3Q9UBC9 169 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 CDC14AQ9UNH5 594 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PCDHA3Q9Y5H8 950 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 GTF3C3Q9Y5Q9 886 aa6.38□□□□□ -1.39
TPM4-210ENST00000588507 MAGED1Q9Y5V3 778 aaPredicted RBP6.38□□□□□ -1.39
TPM4-210ENST00000588507 WIF1Q9Y5W5 379 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms