RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 FBXO42Q6P3S6 717 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 FAM198BQ6UWH4 519 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 PPM1NQ8N819 430 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 TTC29Q8NA56 475 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 FBXL8Q96CD0 374 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 DHRS4Q9BTZ2 278 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 SGPP1Q9BX95 441 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 FUT8Q9BYC5 575 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 DERL2Q9GZP9 239 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 TMEM184CQ9NVA4 438 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 ARL15Q9NXU5 204 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 ESPNB1AK53 854 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 C9J4A7 227 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 ONECUT2O95948 504 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 PRKAR1AP10644 381 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 STMN1P16949 149 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 EMP3P54852 163 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 DCDP81605 110 aaKnown RBP15.37■□□□□ 0.05
RETREG3-206ENST00000588423 FAM214AQ32MH5 1076 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 PTCHD3Q3KNS1 767 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 FRMPD2BQ6IN97 320 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 CAPN13Q6MZZ7 669 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-206ENST00000588423 BORAQ6PGQ7 559 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 LCTLQ6UWM7 567 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 MBOAT1Q6ZNC8 495 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 ADAMTSL2Q86TH1 951 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 OR56A3Q8NH54 315 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 ANKRD49Q8WVL7 239 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 IFT81Q8WYA0 676 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 EXTL1Q92935 676 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 MED8Q96G25 268 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 CYTH2Q99418 400 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 HAUS8Q9BT25 410 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 CAB39LQ9H9S4 337 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 NINJ2Q9NZG7 142 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 DHCR7Q9UBM7 475 aaKnown RBP15.37■□□□□ 0.05
RETREG3-206ENST00000588423 IKZF3Q9UKT9 509 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 OARD1Q9Y530 152 aa15.37■□□□□ 0.05
RETREG3-206ENST00000588423 A0A0J9YVX5 310 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 A0A1B0GX78 115 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 DSCR3O14972 297 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 NRP2O60462 931 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 VSX2P58304 361 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-206ENST00000588423 RAB10P61026 200 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 NAE1Q13564 534 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 ERV3-1Q14264 604 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 NCF4Q15080 339 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 UGT8Q16880 541 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 WASHC2DQ5SRD0 308 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 C16orf46Q6P387 395 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 C17orf64Q86WR6 236 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 IFT20Q8IY31 132 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 ENDOVQ8N8Q3 282 aaKnown RBP15.36■□□□□ 0.05
RETREG3-206ENST00000588423 OR2A5Q96R48 311 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 ATG10Q9H0Y0 220 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 CDC42EP4Q9H3Q1 356 aaKnown RBP15.36■□□□□ 0.05
RETREG3-206ENST00000588423 ACSS3Q9H6R3 686 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 CUTCQ9NTM9 273 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 CTNNAL1Q9UBT7 734 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 TCFL5Q9UL49 500 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 CHD6Q8TD26 2715 aa15.36■□□□□ 0.05
RETREG3-206ENST00000588423 LOC105369274A0A096LPK9 316 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 LOC102723532A0A0G2JNH3 316 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 NPEPPSL1A6NEC2 478 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 H0YGG7 62 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 CDC7O00311 574 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 TXNDC9O14530 226 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 FAM155BO75949 473 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 ANXA5P08758 320 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 PIM1P11309 404 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-206ENST00000588423 SFTPCP11686 197 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 HNMTP50135 292 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 ARF3P61204 181 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-206ENST00000588423 ATP6V0D1P61421 351 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 EFTUD2Q15029 972 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■■□□ 16.7
RETREG3-206ENST00000588423 ZXDCQ2QGD7 858 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-206ENST00000588423 PRTGQ2VWP7 1150 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 NKAIN1Q4KMZ8 207 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 C1orf189Q5VU69 101 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 TTLL10Q6ZVT0 673 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 CCDC91Q7Z6B0 441 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 OR4N4Q8N0Y3 316 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 THAP4Q8WY91 577 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 FKBP10Q96AY3 582 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 UBXN10Q96LJ8 280 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 ARHGAP9Q9BRR9 750 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 L2HGDHQ9H9P8 463 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 ABCF3Q9NUQ8 709 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 CUEDC1Q9NWM3 386 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-206ENST00000588423 IFT80Q9P2H3 777 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-206ENST00000588423 POLHQ9Y253 713 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 PADI2Q9Y2J8 665 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 LOC400499M0QZD8 3231 aa15.35■□□□□ 0.05
RETREG3-206ENST00000588423 SNRNP200O75643 2136 aaKnown RBP15.34■□□□□ 0.05
RETREG3-206ENST00000588423 KCNE1BA0A087WTH5 132 aa15.34■□□□□ 0.05
RETREG3-206ENST00000588423 HYKKA2RU49 373 aa15.34■□□□□ 0.05
RETREG3-206ENST00000588423 EIF4E1BA6NMX2 242 aaKnown RBP15.34■□□□□ 0.05
RETREG3-206ENST00000588423 H7BY64 318 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms