RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MEF2AQ02078 507 aaPredicted RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 PRDX1Q06830 199 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 TCF15Q12870 199 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 ABRAXAS2Q15018 415 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 TBCCQ15814 346 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 SGO1Q5FBB7 561 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 XKR7Q5GH72 579 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 ADNP2Q6IQ32 1131 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 IL27RAQ6UWB1 636 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 EFL1Q7Z2Z2 1120 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 TRIM73Q86UV7 250 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 C17orf64Q86WR6 236 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 DDIASQ8IXT1 998 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 RNF175Q8N4F7 328 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 ARL10Q8N8L6 244 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 OR2L3Q8NG85 312 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 OR2T11Q8NH01 316 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 RSC1A1Q92681 617 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 USP7Q93009 1102 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 MTFMTQ96DP5 389 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 PTCD3Q96EY7 689 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 MAELQ96JY0 434 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 GTPBP2Q9BX10 602 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 STN1Q9H668 368 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 PELI2Q9HAT8 420 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 GEMIN8Q9NWZ8 242 aaKnown RBP10.89□□□□□ -0.67
VMP1-207ENST00000588131 ACTR10Q9NZ32 417 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 NLGN3Q9NZ94 848 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 GIMAP2Q9UG22 337 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 RAB23Q9ULC3 237 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 RNF215Q9Y6U7 377 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 ZNF318Q5VUA4 2279 aa10.89□□□□□ -0.67
VMP1-207ENST00000588131 SDK1Q7Z5N4 2213 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 PIPSLA2A3N6 862 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 GSAPA4D1B5 854 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 OR5K3A6NET4 321 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 LILRA5A6NI73 299 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 H7BY64 318 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 HGSO14964 777 aaPredicted RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 YKT6O15498 198 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 DFNA5O60443 496 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 NRP2O60462 931 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 CHEK2O96017 543 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 PDYNP01213 254 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 SYPP08247 313 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 UGT2B7P16662 529 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 TYRP1P17643 537 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 HNF4AP41235 474 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 NEK2P51955 445 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 PPP1CAP62136 330 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 BIRC2Q13490 618 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 KIR2DS3Q14952 304 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 SF1Q15637 639 aaKnown RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 LSM12Q3MHD2 195 aaKnown RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 KIAA1614Q5VZ46 1190 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 LAIR1Q6GTX8 287 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 Q6ZSR9 355 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 FAM129CQ86XR2 697 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 ANKS4BQ8N8V4 417 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 AVL9Q8NBF6 648 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 SUMF1Q8NBK3 374 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 ZNF740Q8NDX6 193 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 ABHD11Q8NFV4 315 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 WDR20Q8TBZ3 569 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 STON2Q8WXE9 905 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 MAGEB10Q96LZ2 347 aaPredicted RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 RILPQ96NA2 401 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 PRAP1Q96NZ9 151 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 OR2A14Q96R47 310 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 SLC38A3Q99624 504 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 CCDC28BQ9BUN5 200 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 EFCAB11Q9BUY7 163 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 EHD1Q9H4M9 534 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 UCK1Q9HA47 277 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 MRPS30Q9NP92 439 aaKnown RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 TCF7L2Q9NQB0 619 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 HRASLS2Q9NWW9 162 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 ZNF490Q9ULM2 529 aaPredicted RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 APOBEC2Q9Y235 224 aaKnown RBP10.88□□□□□ -0.67
VMP1-207ENST00000588131 KLHL20Q9Y2M5 609 aa10.88□□□□□ -0.67
VMP1-207ENST00000588131 PI4KAP42356 2102 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LY6G6EA0A0G2JKS1 128 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 FEZF1A0PJY2 475 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 E9PBE3 544 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 H0YIV9 168 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 KLHL41O60662 606 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 ULK1O75385 1050 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 KRT6AP02538 564 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 KRT6BP04259 564 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 PCNAP12004 261 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CMPK1P30085 196 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LSSP48449 732 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 KRT6CP48668 564 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CCR8P51685 355 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CSNK1G2P78368 415 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms