RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 NCF1CA8MVU1 366 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ARHGEF33A8MVX0 844 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SUPT3HB4E1H0 165 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SEC16AO15027 2179 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 GLRA3O75311 464 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 PSIP1O75475 530 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SUPT3HO75486 399 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 MATN4O95460 622 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 C1orf105O95561 183 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 GUCA1CO95843 209 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 S100BP04271 92 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 RPN2P04844 631 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 C8GP07360 202 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 GIMD1P0DJR0 217 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 COL6A2P12110 1019 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CKMT1AP12532 417 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 NCF1P14598 390 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ACPPP15309 386 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 POU3F2P20265 443 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CYP2A7P20853 494 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 GSTT1P30711 240 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC26A3P40879 764 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 MAPK9P45984 424 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 KPNA2P52292 529 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 RIPPLY3P57055 190 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 HHEXQ03014 270 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 HYAL2Q12891 473 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SP140Q13342 867 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 PLCL1Q15111 1095 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TGIF1Q15583 401 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TBR1Q16650 682 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 PHKG1Q16816 387 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CCSMST1Q4G0I0 132 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 C14orf28Q4W4Y0 310 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CROCCQ5TZA2 2017 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ZCCHC8Q6NZY4 707 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TTC23LQ6PF05 361 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 MBOAT1Q6ZNC8 495 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SH2D5Q6ZV89 423 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ADAMTSL2Q86TH1 951 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC9B2Q86UD5 537 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 DCUN1D3Q8IWE4 304 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC35F3Q8IY50 421 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ARL14Q8N4G2 192 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ARL10Q8N8L6 244 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 BANPQ8N9N5 519 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CCDC63Q8NA47 563 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ASB11Q8WXH4 323 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 KIAA1191Q96A73 305 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TLCD1Q96CP7 247 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 PDLIM5Q96HC4 596 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ATP6V1G3Q96LB4 118 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 APOLD1Q96LR9 279 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 GPR78Q96P69 363 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 NRTNQ99748 197 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 EGFL8Q99944 293 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SH3GL2Q99962 352 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SELENOSQ9BQE4 189 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 DUSP23Q9BVJ7 150 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TRIM54Q9BYV2 358 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC25A18Q9H1K4 315 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TFB2MQ9H5Q4 396 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 STN1Q9H668 368 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 MVB12BQ9H7P6 319 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CD274Q9NZQ7 290 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 TMEM216Q9P0N5 145 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 SENP1Q9P0U3 644 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CPSF2Q9P2I0 782 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 XPR1Q9UBH6 696 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CPNE7Q9UBL6 633 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 DCDC2Q9UHG0 476 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 ENTPD2Q9Y5L3 495 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 COLEC10Q9Y6Z7 277 aa8.16□□□□□ -1.1
NEDD4L-218ENST00000587547 CPED1A4D0V7 1026 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 GFYI3L273 518 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 UBXN8O00124 270 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 CASC3O15234 703 aaKnown RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 SLC16A5O15375 505 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 ATP8B1O43520 1251 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 KERAO60938 352 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 TNFSF15O95150 251 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 GSTA1P08263 222 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 RBP1P09455 135 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 HIST1H2AGP0C0S8 130 aaPredicted RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 XRCC1P18887 633 aaPredicted RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 HIST1H2ADP20671 130 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 NDUFS1P28331 727 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 HPDP32754 393 aaPredicted RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 CRHR1P34998 444 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 CCT5P48643 541 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 DUSP3P51452 185 aaPredicted RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 UBE2IP63279 158 aaKnown RBP8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 CYP4F2P78329 520 aa8.15□□□□□ -1.1
NEDD4L-218ENST00000587547 GPS2Q13227 327 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms