RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FRMD1Q8N878 549 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 OR13H1Q8NG92 308 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 HUS1BQ8NHY5 278 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 SMPDL3AQ92484 453 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 APIPQ96GX9 242 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 CAMK1GQ96NX5 476 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 MVB12BQ9H7P6 319 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 SPATA6Q9NWH7 488 aaPredicted RBP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 GEMIN8Q9NWZ8 242 aaKnown RBP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 ADA2Q9NZK5 511 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 TBC1D29Q9UFV1 150 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 TAC3Q9UHF0 121 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 PIPSLA2A3N6 862 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 MAGEB17A8MXT2 336 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 AK4P27144 223 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 MAPK1P28482 360 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 LAPTM5Q13571 262 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 TCEA2Q15560 299 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 ADNP2Q6IQ32 1131 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 C17orf64Q86WR6 236 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 FAM160A2Q8N612 972 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 ZBTB18Q99592 522 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 DPY30Q9C005 99 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 PCBD2Q9H0N5 130 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RNPEPL1Q9HAU8 725 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 GID8Q9NWU2 228 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 LEF1Q9UJU2 399 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 PNMA8BQ9ULN7 279 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 DLGAP4Q9Y2H0 992 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 EEDO75530 441 aaKnown RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RASGRP1O95267 797 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 LMNAP02545 664 aaKnown RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 PRPS2P11908 318 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 AMD1P17707 334 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RAB28P51157 221 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 CEACAM7Q14002 265 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RPE65Q16518 533 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 ALG11Q2TAA5 492 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 C10orf62Q5T681 223 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 C8orf82Q6P1X6 216 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 FAM9CQ8IZT9 166 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RNF148Q8N7C7 305 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 APOLD1Q96LR9 279 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 HOPXQ9BPY8 73 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 SLC39A3Q9BRY0 314 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 RAB11FIP5Q9BXF6 653 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 TMEM168Q9H0V1 697 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 DCLRE1BQ9H816 532 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 IL1RL2Q9HB29 575 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 SCHIP1Q9P0W5 487 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-204ENST00000587339 HEBP2Q9Y5Z4 205 aa19.15■□□□□ 0.66
TRIM47-204ENST00000587339 IGHV1OR15-9A0A0B4J2B8 117 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 ASPDHA6ND91 283 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 STK25O00506 426 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 MTHFD1P11586 935 aaKnown RBP19.14■□□□□ 0.65
TRIM47-204ENST00000587339 CDH1P12830 882 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 NUDT1P36639 197 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 ACTR1BP42025 376 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 ACTR1AP61163 376 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 ZNF423Q2M1K9 1284 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 ABRAXAS1Q6UWZ7 409 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 LPCAT2Q7L5N7 544 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 HID1Q8IV36 788 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 LAS2Q8IYD9 372 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 LINC01555Q8NAE3 123 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 GLB1L3Q8NCI6 653 aaPredicted RBP19.14■□□□□ 0.65
TRIM47-204ENST00000587339 CCL4L1Q8NHW4 92 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 SNX19Q92543 992 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 COLEC10Q9Y6Z7 277 aa19.14■□□□□ 0.65
TRIM47-204ENST00000587339 A0A1W2PPC4 97 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 H0Y3Z8 333 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 ACPPP15309 386 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 PCSK2P16519 638 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 ME2P23368 584 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 PXNP49023 591 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-204ENST00000587339 ERFP50548 548 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 MEF2AQ02078 507 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-204ENST00000587339 NFYCQ13952 458 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 TLR1Q15399 786 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 CCDC6Q16204 474 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 NOXRED1Q6NXP6 359 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 SLC30A9Q6PML9 568 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 WASH2PQ6VEQ5 465 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 SLC22A18ASQ8N1D0 253 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 OR52E1Q8NGJ3 308 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 UBE2E3Q969T4 207 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 METTL2AQ96IZ6 378 aaKnown RBP19.13■□□□□ 0.65
TRIM47-204ENST00000587339 TBC1D17Q9HA65 648 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 WASH6PQ9NQA3 447 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 TRNAU1APQ9NX07 287 aaKnown RBP19.13■□□□□ 0.65
TRIM47-204ENST00000587339 A0A1W2PPV9 198 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 PAGE3Q5JUK9 113 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 PHACTR4Q8IZ21 702 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 MINDY1Q8N5J2 469 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 CLHC1Q8NHS4 586 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 LRRC58Q96CX6 371 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 SPNS1Q9H2V7 528 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 XKR8Q9H6D3 395 aa19.13■□□□□ 0.65
TRIM47-204ENST00000587339 PCOLCE2Q9UKZ9 415 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms