RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MAN2B2Q9Y2E5 1009 aa14.2□□□□□ -0.14
ATG4D-207ENST00000587256 ATMQ13315 3056 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 PIEZO2Q9H5I5 2752 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 A0A1B0GX78 115 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 NPEPPSL1A6NEC2 478 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 SRPX2O60687 465 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 ENO2P09104 434 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 EZRP15311 586 aaKnown RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 ALAS2P22557 587 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 POLE2P56282 527 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 AP1S2P56377 157 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 DCDP81605 110 aaKnown RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 POU4F1Q01851 419 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 IL10RAQ13651 578 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 SLMAPQ14BN4 828 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 KBTBD12Q3ZCT8 623 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 YOD1Q5VVQ6 348 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 MLIPQ5VWP3 458 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 ZNF385CQ66K41 422 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 CEP128Q6ZU80 1094 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 FRA10AC1Q70Z53 315 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 PAQR7Q86WK9 346 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 LRRC56Q8IYG6 542 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 CEP112Q8N8E3 955 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 FBF1Q8TES7 1133 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 APOBEC4Q8WW27 367 aaKnown RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 FAM129AQ9BZQ8 928 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 PCBD2Q9H0N5 130 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 CAB39LQ9H9S4 337 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 POPDC3Q9HBV1 291 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 LRRC4CQ9HCJ2 640 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 CUEDC1Q9NWM3 386 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 IFT80Q9P2H3 777 aaPredicted RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 TCFL5Q9UL49 500 aa14.19□□□□□ -0.14
ATG4D-207ENST00000587256 MTO1Q9Y2Z2 717 aaKnown RBP14.19□□□□□ -0.14
ATG4D-207ENST00000587256 SMG1Q96Q15 3661 aaKnown RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 LOC105369274A0A096LPK9 316 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 IGKV1-8A0A0C4DH67 115 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 LOC102723532A0A0G2JNH3 316 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 DSCR3O14972 297 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 GUCA1CO95843 209 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 FURINP09958 794 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 CCND1P24385 295 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 NFKB2Q00653 900 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 NAB1Q13506 487 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 NAE1Q13564 534 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 USP10Q14694 798 aaKnown RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 EFTUD2Q15029 972 aaKnown RBP eCLIP14.18□□□□□ -0.145e-7■■□□□ 11.5
ATG4D-207ENST00000587256 UGT8Q16880 541 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 NKAIN1Q4KMZ8 207 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 GLE1Q53GS7 698 aaKnown RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 WASHC2DQ5SRD0 308 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 FAM69BQ5VUD6 431 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 ZNF425Q6IV72 752 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 CAPN13Q6MZZ7 669 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 TMEM207Q6UWW9 146 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 CYS1Q717R9 158 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 ADAMTSL2Q86TH1 951 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 CEP97Q8IW35 865 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 OR4N4Q8N0Y3 316 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 METTL27Q8N6F8 245 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 EXD3Q8N9H8 876 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 ATL1Q8WXF7 558 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 IFT81Q8WYA0 676 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 RERGQ96A58 199 aaPredicted RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 PDLIM5Q96HC4 596 aaKnown RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 ZNF285Q96NJ3 590 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 GPR22Q99680 433 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 MCMBPQ9BTE3 642 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 DHRS4Q9BTZ2 278 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 SEMA4CQ9C0C4 833 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 DMGDHQ9UI17 866 aaKnown RBP14.18□□□□□ -0.14
ATG4D-207ENST00000587256 IKZF3Q9UKT9 509 aa14.18□□□□□ -0.14
ATG4D-207ENST00000587256 HYKKA2RU49 373 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 FITM1A5D6W6 292 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 H0YGG7 62 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 H7BY64 318 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 CDC7O00311 574 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 HAT1O14929 419 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 PHGDHO43175 533 aaKnown RBP14.17□□□□□ -0.14
ATG4D-207ENST00000587256 RECKO95980 971 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 C1QAP02745 245 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 CAPN1P07384 714 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 SFTPCP11686 197 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 STMN1P16949 149 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 PHBP35232 272 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 SPRP35270 261 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-207ENST00000587256 FOLR3P41439 243 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 GCGRP47871 477 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 ARF3P61204 181 aaPredicted RBP14.17□□□□□ -0.14
ATG4D-207ENST00000587256 KCNAB2Q13303 367 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 FAM214AQ32MH5 1076 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 SBSNQ6UWP8 590 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 C17orf64Q86WR6 236 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 PLD3Q8IV08 490 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 CSNK1A1LQ8N752 337 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 FBXL8Q96CD0 374 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
ATG4D-207ENST00000587256 PRAP1Q96NZ9 151 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms