RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ADCK2Q7Z695 626 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 GALNT7Q86SF2 657 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 PAQR7Q86WK9 346 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 ANKMY2Q8IV38 441 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 LRRC56Q8IYG6 542 aaPredicted RBP16.91■□□□□ 0.3
TPM4-206ENST00000587201 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 GPATCH11Q8N954 259 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 FDCSPQ8NFU4 85 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 LINGO1Q96FE5 620 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 FER1L6-AS2Q96M78 137 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 WDR83Q9BRX9 315 aaKnown RBP16.91■□□□□ 0.3
TPM4-206ENST00000587201 ADAMTS6Q9UKP5 1117 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 SNX24Q9Y343 169 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 MAU2Q9Y6X3 613 aa16.91■□□□□ 0.3
TPM4-206ENST00000587201 H0YGG7 62 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 NDC80O14777 642 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 CEACAM4O75871 244 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 IGHEP01854 428 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 C8GP07360 202 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 RPL21P46778 160 aaKnown RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 ARF3P61204 181 aaPredicted RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 MRPS25P82663 173 aaKnown RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 PDIA2Q13087 525 aaKnown RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 PDAP1Q13442 181 aaKnown RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 NKG7Q16617 165 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 STEAP4Q687X5 459 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 COX15Q7KZN9 410 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 TMEM151BQ8IW70 566 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 DTWD1Q8N5C7 304 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 FBXO36Q8NEA4 188 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 COL26A1Q96A83 441 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 CABS1Q96KC9 395 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 CCDC138Q96M89 665 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 NUDT9Q9BW91 350 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 ZNF304Q9HCX3 659 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 MLXIPLQ9NP71 852 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 CCDC177Q9NQR7 707 aaPredicted RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 P4HTMQ9NXG6 502 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 STOX2Q9P2F5 926 aaPredicted RBP16.9■□□□□ 0.3
TPM4-206ENST00000587201 PDE10AQ9Y233 779 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 ZNF451Q9Y4E5 1061 aa16.9■□□□□ 0.3
TPM4-206ENST00000587201 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.9■□□□□ 0.32e-7■■□□□ 14.5
TPM4-206ENST00000587201 MED13Q9UHV7 2174 aa16.89■□□□□ 0.3
TPM4-206ENST00000587201 MED26O95402 600 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 EZRP15311 586 aaKnown RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 CASQ1P31415 396 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 SP140Q13342 867 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 RAPSNQ13702 412 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 HECTD2Q5U5R9 776 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 ZNF425Q6IV72 752 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 FAM45BPQ6NSW5 357 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PRMT9Q6P2P2 845 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PPP1R32Q7Z5V6 425 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 CSNK1A1LQ8N752 337 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 CLEC1AQ8NC01 280 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 FAM45AQ8TCE6 357 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 RERGQ96A58 199 aaPredicted RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 SPSB2Q99619 263 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 SLC26A1Q9H2B4 701 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 SOX17Q9H6I2 414 aaPredicted RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 WDR54Q9H977 334 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PARVBQ9HBI1 364 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 CUEDC1Q9NWM3 386 aaPredicted RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 GPR83Q9NYM4 423 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 ZFATQ9P243 1243 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 CDC23Q9UJX2 597 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 NXT1Q9UKK6 140 aaKnown RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 CORO1CQ9ULV4 474 aaPredicted RBP16.89■□□□□ 0.29
TPM4-206ENST00000587201 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PCDHGB7Q9Y5F8 929 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PCM1Q15154 2024 aa16.89■□□□□ 0.29
TPM4-206ENST00000587201 PCSK5Q92824 1860 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 CCDC88CQ9P219 2028 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 FAM187AA6NFU0 413 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 TP73O15350 636 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 SLC16A5O15375 505 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 HIST1H2AGP0C0S8 130 aaPredicted RBP16.88■□□□□ 0.29
TPM4-206ENST00000587201 HIST1H2ADP20671 130 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 IL2P60568 153 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 TBPL1P62380 186 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 FASTKD3Q14CZ7 662 aaKnown RBP16.88■□□□□ 0.29
TPM4-206ENST00000587201 IGFBP7Q16270 282 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 PRTGQ2VWP7 1150 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 DCAF10Q5QP82 559 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 PRAMEF13Q5VWM6 474 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 MBOAT1Q6ZNC8 495 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 SHISA6Q6ZSJ9 500 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 C17orf53Q8N3J3 647 aaPredicted RBP16.88■□□□□ 0.29
TPM4-206ENST00000587201 ALKBH8Q96BT7 664 aaKnown RBP16.88■□□□□ 0.29
TPM4-206ENST00000587201 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 C10orf90Q96M02 699 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 OR2A5Q96R48 311 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 DPH5Q9H2P9 285 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 CTSFQ9UBX1 484 aa16.88■□□□□ 0.29
TPM4-206ENST00000587201 RUVBL1Q9Y265 456 aaKnown RBP16.88■□□□□ 0.29
TPM4-206ENST00000587201 TNRC6AQ8NDV7 1962 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms