RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
BRCA1-225ENST00000586385 TCAF1Q9Y4C2 921 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
BRCA1-225ENST00000586385 BTNL10A8MVZ5 291 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 P2RX6O15547 441 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ZNF189O75820 626 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ETS1P14921 441 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ADRA1DP25100 572 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ARNTP27540 789 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 SLC26A3P40879 764 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 KIR3DL1P43629 444 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 EMP3P54852 163 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 SPA17Q15506 151 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 OASLQ15646 514 aaKnown RBP11.28□□□□□ -0.6
BRCA1-225ENST00000586385 C3AR1Q16581 482 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 FASTKD1Q53R41 847 aaKnown RBP11.28□□□□□ -0.6
BRCA1-225ENST00000586385 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.28□□□□□ -0.6
BRCA1-225ENST00000586385 CTSL3PQ5NE16 218 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 NCCRP1Q6ZVX7 275 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-225ENST00000586385 PAQR7Q86WK9 346 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 DNAAF3Q8N9W5 541 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 RNF214Q8ND24 703 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 RAD51AP1Q96B01 352 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 PLCD4Q9BRC7 762 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 ACAT2Q9BWD1 397 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 SEC14L3Q9UDX4 400 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 TINAGQ9UJW2 476 aa11.28□□□□□ -0.6
BRCA1-225ENST00000586385 OR5H15A6NDH6 313 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 ARHGEF33A8MVX0 844 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 PRAMEF2O60811 474 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 RASAL1O95294 804 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 MATN4O95460 622 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 COX6B1P14854 86 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 ST13P50502 369 aaKnown RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 MAT1AQ00266 395 aaKnown RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 TMED2Q15363 201 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF425Q6IV72 752 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 SUSD1Q6UWL2 747 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 RAD9BQ6WBX8 426 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 RPTNQ6XPR3 784 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 NEK10Q6ZWH5 1172 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CABS1Q96KC9 395 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 BIRC8Q96P09 236 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 OR2A5Q96R48 311 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 TTC1Q99614 292 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 NPAS2Q99743 824 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CHST11Q9NPF2 352 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CHRAC1Q9NRG0 131 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 C14orf105Q9NVL8 296 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 RIC8BQ9NVN3 520 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 GALPQ9UBC7 116 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 SUCOQ9UBS9 1254 aaKnown RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF835Q9Y2P0 537 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
BRCA1-225ENST00000586385 PCNX1Q96RV3 2341 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 MTORP42345 2549 aa11.27□□□□□ -0.61
BRCA1-225ENST00000586385 A0A0A6YYC8 382 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 IGHV3-20A0A0C4DH32 117 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 F8W8V4 182 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 I3L1I5 382 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 CD3EAPO15446 510 aaKnown RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 MAN1A2O60476 641 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 SLC19A2O60779 497 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 WFS1O76024 890 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 CRYABP02511 175 aaKnown RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 HEXBP07686 556 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 RPS3P23396 243 aaKnown RBP eCLIP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 PRAMEP78395 509 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 CRADDP78560 199 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 PTRHD1Q6GMV3 140 aaKnown RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 LRRC8BQ6P9F7 803 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 PPP1R21Q6ZMI0 780 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 CHERPQ8IWX8 916 aaKnown RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 ACBD4Q8NC06 268 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 PEX13Q92968 403 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 MVB12AQ96EY5 273 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 MMABQ96EY8 250 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 VN1R1Q9GZP7 353 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 MKKSQ9NPJ1 570 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 SPATA7Q9P0W8 599 aa11.26□□□□□ -0.61
BRCA1-225ENST00000586385 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-225ENST00000586385 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-225ENST00000586385 CPAMD8Q8IZJ3 1885 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms