RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 GLYATQ6IB77 296 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 KIAA1161Q6NSJ0 714 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TMEM154Q6P9G4 183 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 CRTC3Q6UUV7 619 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PARM1Q6UWI2 310 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 LCTLQ6UWM7 567 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.9□□□□□ -0.66
LIG3-204ENST00000585740 GPR180Q86V85 440 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 IFNEQ86WN2 208 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 HEATR4Q86WZ0 1026 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SYT12Q8IV01 421 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ADGRG5Q8IZF4 528 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 GJD3Q8N144 294 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 MARVELD2Q8N4S9 558 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 OR52E4Q8NGH9 312 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ZNF480Q8WV37 535 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 NELL1Q92832 810 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 CHFRQ96EP1 664 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 APIPQ96GX9 242 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 APOLD1Q96LR9 279 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PPM1MQ96MI6 270 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TMEM74Q96NL1 305 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 OR4K3Q96R72 315 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 HAUS8Q9BT25 410 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 C9orf16Q9BUW7 83 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TEX101Q9BY14 249 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ZDHHC5Q9C0B5 715 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 OR52A5Q9H2C5 316 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 RMI1Q9H9A7 625 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 CCDC177Q9NQR7 707 aaPredicted RBP10.9□□□□□ -0.66
LIG3-204ENST00000585740 SIRT5Q9NXA8 310 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 LMCD1Q9NZU5 365 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SPATA7Q9P0W8 599 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SCML1Q9UN30 329 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 DLGAP4Q9Y2H0 992 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TSC22D4Q9Y3Q8 395 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TRBV5-3A0A0A0MS03 114 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 TCRBV5S2A0A599 114 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 A6NHS1 94 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 FAM220BPB1ANY3 271 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 FOXE1O00358 373 aaPredicted RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 GSTA4O15217 222 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
LIG3-204ENST00000585740 SCELO95171 688 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 LYNP07948 512 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CDH1P12830 882 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 GGT1P19440 569 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CD22P20273 847 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 NTSR1P30989 418 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 RPL3P39023 403 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 KIR3DL1P43629 444 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 POLE2P56282 527 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 TAS2R38P59533 333 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 RPS21P63220 83 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 MTAPQ13126 283 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CYP51A1Q16850 503 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 WSCD2Q2TBF2 565 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CCSMST1Q4G0I0 132 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 INTS11Q5TA45 600 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 SLCO4C1Q6ZQN7 724 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 C11orf96Q7Z7L8 435 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 TMPRSS11BQ86T26 416 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 ZNF547Q8IVP9 402 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 RIMKLAQ8IXN7 391 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 LAS2Q8IYD9 372 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 RAB42Q8N4Z0 105 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 KRTCAP2Q8N6L1 136 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 SLC5A11Q8WWX8 675 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 FGF14Q92915 247 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CXorf40BQ96DE9 158 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 CENPNQ96H22 339 aaPredicted RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 TSSK3Q96PN8 268 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 GBP5Q96PP8 586 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 PRPF18Q99633 342 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 GABRG3Q99928 467 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 OSBPL11Q9BXB4 747 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 UGT2B28Q9BY64 529 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 PAIP1Q9H074 479 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 PCBD2Q9H0N5 130 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 GORASP2Q9H8Y8 452 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 FAM120CQ9NX05 1096 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 VAPAQ9P0L0 249 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 SLAMF8Q9P0V8 285 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
LIG3-204ENST00000585740 ADGRE2Q9UHX3 823 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 PPT2Q9UMR5 302 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 AURKCQ9UQB9 309 aa10.89□□□□□ -0.67
LIG3-204ENST00000585740 A0A1W2PP55 124 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 EVPLLA8MZ36 301 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 DFNA5O60443 496 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 TIPRLO75663 272 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 DNTTP04053 509 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 C7P10643 843 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 PCNAP12004 261 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 SERPINB1P30740 379 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 TIE1P35590 1138 aa10.88□□□□□ -0.67
LIG3-204ENST00000585740 TRIM23P36406 574 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms