RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 CSNK1G2P78368 415 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 CFHR1Q03591 330 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 SF3A3Q12874 501 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPC24-202ENST00000585486 KIR2DS3Q14952 304 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 XKR6Q5GH73 641 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 ZCCHC8Q6NZY4 707 aaKnown RBP12.89□□□□□ -0.35
SPC24-202ENST00000585486 Q6ZSR9 355 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 VN1R5Q7Z5H4 357 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 LAS2Q8IYD9 372 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 ANKS4BQ8N8V4 417 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 ZNF740Q8NDX6 193 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 METTL6Q8TCB7 284 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 RSC1A1Q92681 617 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 PTCD3Q96EY7 689 aaKnown RBP12.89□□□□□ -0.35
SPC24-202ENST00000585486 SEC16BQ96JE7 1060 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 FAR2Q96K12 515 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 APOLD1Q96LR9 279 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 SARGQ9BW04 601 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 ACAT2Q9BWD1 397 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 TMEM120AQ9BXJ8 343 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
SPC24-202ENST00000585486 ACTR8Q9H981 624 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 PELI2Q9HAT8 420 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 FARSBQ9NSD9 589 aaKnown RBP12.89□□□□□ -0.35
SPC24-202ENST00000585486 DCTN4Q9UJW0 460 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 BTBD3Q9Y2F9 522 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 HCN4Q9Y3Q4 1203 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 PCDHGB2Q9Y5G2 931 aa12.89□□□□□ -0.35
SPC24-202ENST00000585486 OTOGLQ3ZCN5 2332 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 PIPSLA2A3N6 862 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 CLGNO14967 610 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 GLB1P16278 677 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 POLR2CP19387 275 aaPredicted RBP12.88□□□□□ -0.35
SPC24-202ENST00000585486 HNF4AP41235 474 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 EPHA4P54764 986 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ABATP80404 500 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 REEP5Q00765 189 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 IRF8Q02556 426 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ABRAXAS2Q15018 415 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
SPC24-202ENST00000585486 SLC5A12Q1EHB4 618 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 LARP4Q71RC2 724 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPC24-202ENST00000585486 TRIM46Q7Z4K8 759 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 KIRREL3Q8IZU9 778 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 RAB42Q8N4Z0 105 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 SH3KBP1Q96B97 665 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 DUSP23Q9BVJ7 150 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 NUF2Q9BZD4 464 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 RAB33BQ9H082 229 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ABCG4Q9H172 646 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 WDR55Q9H6Y2 383 aaPredicted RBP12.88□□□□□ -0.35
SPC24-202ENST00000585486 NT5DC2Q9H857 520 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 PARD6AQ9NPB6 346 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 RXFP3Q9NSD7 469 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ABCF3Q9NUQ8 709 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ACTR10Q9NZ32 417 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 LRIT1Q9P2V4 623 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 GMEB2Q9UKD1 530 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 POMT2Q9UKY4 750 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 RAB23Q9ULC3 237 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 PADI4Q9UM07 663 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 DYRK1BQ9Y463 629 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 ENTPD2Q9Y5L3 495 aa12.88□□□□□ -0.35
SPC24-202ENST00000585486 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 H7BY64 318 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 NDUFAB1O14561 156 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 FFAR3O14843 346 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 GPR42O15529 346 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 LCMT2O60294 686 aaKnown RBP12.87□□□□□ -0.35
SPC24-202ENST00000585486 UBXN7O94888 489 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 TROVE2P10155 538 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPC24-202ENST00000585486 PNLIPP16233 465 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 CD1CP29017 333 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 GRIA3P42263 894 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 GPR3P46089 330 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 MEF2AQ02078 507 aaPredicted RBP12.87□□□□□ -0.35
SPC24-202ENST00000585486 SQSTM1Q13501 440 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPC24-202ENST00000585486 PLCL1Q15111 1095 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 SF3A2Q15428 464 aaKnown RBP12.87□□□□□ -0.35
SPC24-202ENST00000585486 ZIC1Q15915 447 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
SPC24-202ENST00000585486 CPSF6Q16630 551 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPC24-202ENST00000585486 FRG2Q64ET8 278 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 SPESP1Q6UW49 350 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 SCIMPQ6UWF3 145 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 TMPRSS11BQ86T26 416 aa12.87□□□□□ -0.35
SPC24-202ENST00000585486 TRIM73Q86UV7 250 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms