RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 MARCOQ9UEW3 520 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 EPHA6Q9UF33 1036 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 POMT2Q9UKY4 750 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 RNF11Q9Y3C5 154 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 TSC22D4Q9Y3Q8 395 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 DNAJC15Q9Y5T4 150 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 USH1CQ9Y6N9 552 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 IGKV1-8A0A0C4DH67 115 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 ISM1B1AKI9 464 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 TMEM233B4DJY2 109 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 H0YIV9 168 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 HGSO14964 777 aaPredicted RBP15.54■□□□□ 0.08
SS18-226ENST00000585241 FLRT2O43155 660 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 SNX3O60493 162 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 PROS1P07225 676 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CAPN1P07384 714 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CKMT1AP12532 417 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CDH1P12830 882 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 UGT2B7P16662 529 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 POLR2CP19387 275 aaPredicted RBP15.54■□□□□ 0.08
SS18-226ENST00000585241 TGM1P22735 817 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CMPK1P30085 196 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 GRK6P43250 576 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 REEP5Q00765 189 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 SPEM2Q0P670 501 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 LAPTM5Q13571 262 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 XKR6Q5GH73 641 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CATSPEREQ5SY80 951 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CLEC6AQ6EIG7 209 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 ZNF425Q6IV72 752 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 PIGWQ7Z7B1 504 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CPLX4Q7Z7G2 160 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CDYL2Q8N8U2 506 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 DCBLD1Q8N8Z6 715 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 AGR3Q8TD06 166 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 USP7Q93009 1102 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 NAT6Q93015 286 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 KCNA7Q96RP8 456 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 EDEM2Q9BV94 578 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 SARGQ9BW04 601 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 ACAT2Q9BWD1 397 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 SLC6A20Q9NP91 592 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 MRPS30Q9NP92 439 aaKnown RBP15.54■□□□□ 0.08
SS18-226ENST00000585241 PARD6AQ9NPB6 346 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 ABCF3Q9NUQ8 709 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 FAM86C1Q9NVL1 165 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 CUEDC1Q9NWM3 386 aaPredicted RBP15.54■□□□□ 0.08
SS18-226ENST00000585241 HRASLS2Q9NWW9 162 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 GEMIN8Q9NWZ8 242 aaKnown RBP15.54■□□□□ 0.08
SS18-226ENST00000585241 ANKMY1Q9P2S6 941 aa15.54■□□□□ 0.08
SS18-226ENST00000585241 HEATR5BQ9P2D3 2071 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 IGHV1OR21-1A0A087WYE8 117 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 SERTM1A2A2V5 107 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 TNFSF14O43557 240 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 FOXD2O60548 495 aaPredicted RBP15.53■□□□□ 0.08
SS18-226ENST00000585241 KITP10721 976 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 VARSP26640 1264 aaKnown RBP15.53■□□□□ 0.08
SS18-226ENST00000585241 CCR8P51685 355 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 YBX1P67809 324 aaKnown RBP15.53■□□□□ 0.08
SS18-226ENST00000585241 CSNK1G2P78368 415 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 GPLD1P80108 840 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 ZNF33BQ06732 778 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 SQSTM1Q13501 440 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 NAA25Q14CX7 972 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 PAGE2BQ5JRK9 111 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 C10orf62Q5T681 223 aaPredicted RBP15.53■□□□□ 0.08
SS18-226ENST00000585241 SPESP1Q6UW49 350 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 SPATA21Q7Z572 469 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 LAS2Q8IYD9 372 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 OR10G6Q8NH81 332 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 METTL6Q8TCB7 284 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 TWIST2Q8WVJ9 160 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 CCT7Q99832 543 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 NT5DC2Q9H857 520 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 KCNK13Q9HB14 408 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 NPHS2Q9NP85 383 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 TMEM184CQ9NVA4 438 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 KCNK4Q9NYG8 393 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 NCDNQ9UBB6 729 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 BTBD3Q9Y2F9 522 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 HCN4Q9Y3Q4 1203 aa15.53■□□□□ 0.08
SS18-226ENST00000585241 SNRNP200O75643 2136 aaKnown RBP15.53■□□□□ 0.08
SS18-226ENST00000585241 LAMA1P25391 3075 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 DNAH14Q0VDD8 3507 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 GSAPA4D1B5 854 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 DLL1O00548 723 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 B4GAT1O43505 415 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 CRCPO75575 148 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 TYRP1P17643 537 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 AMD1P17707 334 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 HMOX2P30519 316 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 ARL1P40616 181 aaPredicted RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 GRIA3P42263 894 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 HTR6P50406 440 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 DUSP3P51452 185 aaPredicted RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 RELAQ04206 551 aa15.52■□□□□ 0.08
SS18-226ENST00000585241 SLBPQ14493 270 aaKnown RBP eCLIP15.52■□□□□ 0.08
SS18-226ENST00000585241 SF1Q15637 639 aaKnown RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 ZRSR2Q15696 482 aaKnown RBP15.52■□□□□ 0.08
SS18-226ENST00000585241 KIAA1614Q5VZ46 1190 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms