RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 KCNAB1Q14722 419 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 PTCHD3Q3KNS1 767 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 BEND6Q5SZJ8 279 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 FIGLAQ6QHK4 219 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 CEACAM20Q6UY09 585 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 THOC6Q86W42 341 aaKnown RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 BPHLQ86WA6 291 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 C4orf33Q8N1A6 199 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 OR2A1Q8NGT9 310 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 OR8K5Q8NH50 307 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 KLHL6Q8WZ60 621 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 RERGQ96A58 199 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 SLC41A2Q96JW4 573 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 PPM1MQ96MI6 270 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 TRAPPC9Q96Q05 1148 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 TEFMQ96QE5 360 aaKnown RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 ZPBPQ9BS86 351 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 PRORYQ9H606 182 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 FGF21Q9NSA1 209 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 DNAJC11Q9NVH1 559 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 XPR1Q9UBH6 696 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 LGALS13Q9UHV8 139 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 MID2Q9UJV3 735 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 KLHL20Q9Y2M5 609 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
TRAF4-215ENST00000584944 GCN1Q92616 2671 aaKnown RBP13.34□□□□□ -0.27
TRAF4-215ENST00000584944 UQCRHLA0A096LP55 91 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 TARM1B6A8C7 271 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 TMEM150CB9EJG8 249 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 UQCRHP07919 91 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CCL4P13236 92 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 GNAZP19086 355 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 ITIH1P19827 911 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 HSPA7P48741 367 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CCR8P51685 355 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CASP8Q14790 479 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 GPR19Q15760 415 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PDK4Q16654 411 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CCDC153Q494R4 210 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 KIAA1614Q5VZ46 1190 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 LCTLQ6UWM7 567 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PPP1R3BQ86XI6 285 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 TMEM126BQ8IUX1 230 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 FAM20CQ8IXL6 584 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PLD6Q8N2A8 252 aaKnown RBP13.33□□□□□ -0.28
TRAF4-215ENST00000584944 D2HGDHQ8N465 521 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PDPRQ8NCN5 879 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PPP4R1Q8TF05 950 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 ATP6V1E2Q96A05 226 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-215ENST00000584944 CTRCQ99895 268 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 SGPP1Q9BX95 441 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 NLNQ9BYT8 704 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 OCIAD1Q9NX40 245 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 ANKMY1Q9P2S6 941 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 PLCL2Q9UPR0 1127 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 SLC22A14Q9Y267 594 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 BTRCQ9Y297 605 aa13.33□□□□□ -0.28
TRAF4-215ENST00000584944 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 H7BY64 318 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 BRINP1O60477 761 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 KATNA1O75449 491 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 EIF2S1P05198 315 aaKnown RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 MYL2P10916 166 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 FGF3P11487 239 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 CDH1P12830 882 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 EZRP15311 586 aaKnown RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 EPB42P16452 691 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 GRIA3P42263 894 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 SH3BP2P78314 561 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 MC2RQ01718 297 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 CDC16Q13042 620 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 TECRLQ5HYJ1 363 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 CLEC14AQ86T13 490 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 IQCKQ8N0W5 287 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 ZNF655Q8N720 491 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-215ENST00000584944 SLC5A11Q8WWX8 675 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 FGF11Q92914 225 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 USP7Q93009 1102 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 ZBTB9Q96C00 473 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 PHF21BQ96EK2 531 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 APOPT1Q96IL0 206 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 PRAP1Q96NZ9 151 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 ATOH8Q96SQ7 321 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 SELENOSQ9BQE4 189 aa13.32□□□□□ -0.28
TRAF4-215ENST00000584944 DDA1Q9BW61 102 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms