RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 FAM53CQ9NYF3 392 aa17.63■□□□□ 0.41
RFFL-211ENST00000584541 ANKMY1Q9P2S6 941 aa17.63■□□□□ 0.41
RFFL-211ENST00000584541 KLHL3Q9UH77 587 aa17.63■□□□□ 0.41
RFFL-211ENST00000584541 NTN3O00634 580 aaPredicted RBP17.62■□□□□ 0.41
RFFL-211ENST00000584541 C1GALT1C1LP0DN25 315 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CEACAM1P13688 526 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 TSPAN8P19075 237 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CXCR2P25025 360 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 GRK3P35626 688 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 PKNOX1P55347 436 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CFHR1Q03591 330 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CHIT1Q13231 466 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 LAPTM5Q13571 262 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 SNAP47Q5SQN1 464 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CACHD1Q5VU97 1274 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 ATG9BQ674R7 924 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 NXPE4Q6UWF7 544 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 MILR1Q7Z6M3 343 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 FAM20CQ8IXL6 584 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 TBC1D19Q8N5T2 526 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 OR6Y1Q8NGX8 325 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 CKAP2Q8WWK9 683 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 ZUFSPQ96AP4 578 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 MOCOSQ96EN8 888 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 PTCD3Q96EY7 689 aaKnown RBP17.62■□□□□ 0.41
RFFL-211ENST00000584541 MAGEB18Q96M61 343 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 ZNF382Q96SR6 550 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 MAP3K3Q99759 626 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 NTMT1Q9BV86 223 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 EHD1Q9H4M9 534 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 ZBTB26Q9HCK0 441 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 TMEM184CQ9NVA4 438 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 SH2B3Q9UQQ2 575 aa17.62■□□□□ 0.41
RFFL-211ENST00000584541 APOBEC2Q9Y235 224 aaKnown RBP17.62■□□□□ 0.41
RFFL-211ENST00000584541 ZFHX2Q9C0A1 2572 aaPredicted RBP17.62■□□□□ 0.41
RFFL-211ENST00000584541 FAM186AA6NE01 2351 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 PCNX2A6NKB5 2137 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 D6RAR5 112 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 H7BY64 318 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 OR7A17O14581 309 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 TM4SF5O14894 197 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 KLF11O14901 512 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 TOX3O15405 576 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 UGDHO60701 494 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 CLDN9O95484 217 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 HSPA4LO95757 839 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 EBLN1P0CF75 366 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 EPORP19235 508 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 MAGP20916 626 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 GRIA3P42263 894 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 SLC1A6P48664 564 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 ARL4DP49703 201 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 ABCE1P61221 599 aaKnown RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 PCDH1Q08174 1060 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 GALNT1Q10472 559 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 TBCCQ15814 346 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 HIST2H2ACQ16777 129 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 PAGE2BQ5JRK9 111 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 CATSPEREQ5SY80 951 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 LIPJQ5W064 366 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 HIST2H2AA3Q6FI13 130 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 FIGLAQ6QHK4 219 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 SLCO4C1Q6ZQN7 724 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 GPRIN3Q6ZVF9 776 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 PRSS42Q7Z5A4 293 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 MYLK4Q86YV6 388 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 ABHD11Q8NFV4 315 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 ZNF75CPQ92670 426 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 PRAP1Q96NZ9 151 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 AIF1LQ9BQI0 150 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 EFCAB11Q9BUY7 163 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 SLC6A20Q9NP91 592 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 MID1IP1Q9NPA3 183 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 CUEDC1Q9NWM3 386 aaPredicted RBP17.61■□□□□ 0.41
RFFL-211ENST00000584541 TMEM9Q9P0T7 183 aa17.61■□□□□ 0.41
RFFL-211ENST00000584541 SLC9B1P1A6NJY1 282 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 A8MU76 341 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 CRCPO75575 148 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 ZBTB11O95625 1053 aaPredicted RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 HOXB3P14651 431 aaPredicted RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 MPSTP25325 297 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 MDH1P40925 334 aaKnown RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 HNF4AP41235 474 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 CASP2P42575 452 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 NOVA1P51513 510 aaKnown RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 YBX1P67809 324 aaKnown RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 BST1Q10588 318 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 DOC2AQ14183 400 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 ARL13AQ5H913 290 aaPredicted RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 RBM44Q6ZP01 1051 aaKnown RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 KMT5CQ86Y97 462 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 HOMEZQ8IX15 550 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 KRT78Q8N1N4 520 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 C19orf47Q8N9M1 422 aaKnown RBP17.6■□□□□ 0.41
RFFL-211ENST00000584541 OR52B6Q8NGF0 335 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 GRAMD1AQ96CP6 724 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 WDR34Q96EX3 536 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 PPM1MQ96MI6 270 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 TMEM74Q96NL1 305 aa17.6■□□□□ 0.41
RFFL-211ENST00000584541 TRAPPC9Q96Q05 1148 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms