RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TYSND1Q2T9J0 566 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 NKAIN1Q4KMZ8 207 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 TCTE1Q5JU00 501 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 DCAF10Q5QP82 559 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 C1orf189Q5VU69 101 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 YOD1Q5VVQ6 348 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CASC4Q6P4E1 433 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 FIGLAQ6QHK4 219 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 TAX1BP1Q86VP1 789 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 ZBTB2Q8N680 514 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 DNAJB8Q8NHS0 232 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 LPGAT1Q92604 370 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 ZUFSPQ96AP4 578 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 FER1L6-AS2Q96M78 137 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 IL17FQ96PD4 163 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 XAB2Q9HCS7 855 aaKnown RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CCM2LQ9NUG4 571 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 DHCR7Q9UBM7 475 aaKnown RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CIDEBQ9UHD4 219 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 PTRH2Q9Y3E5 179 aaKnown RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 SCN3AQ9NY46 2000 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 FAM237BA0A1B0GVD1 139 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 TCRBV7S3A2A0A539 114 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 TARM1B6A8C7 271 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 E5RI56 91 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 PEX12O00623 359 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 KLF7O75840 302 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 STSP08842 583 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 MLNP12872 115 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FMO4P31512 558 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 BDKRB1P46663 353 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 TERF1P54274 439 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 Q0VFX4 171 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 ATP1A4Q13733 1029 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 GRM7Q14831 915 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 CTSL3PQ5NE16 218 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FAM69BQ5VUD6 431 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 CNSTQ6PJW8 725 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 CES3Q6UWW8 571 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 MRGPREQ86SM8 312 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 KCNMB4Q86W47 210 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 MCATQ8IVS2 390 aaKnown RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 RASGEF1CQ8N431 466 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 C2orf73Q8N5S3 287 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 TTC29Q8NA56 475 aaPredicted RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FDCSPQ8NFU4 85 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 OR2Y1Q8NGV0 311 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 HMGCLL1Q8TB92 370 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 MAGOHBQ96A72 148 aaKnown RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FKBP10Q96AY3 582 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 PTERQ96BW5 349 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 BIRC8Q96P09 236 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FAM114A2Q9NRY5 505 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 INTS10Q9NVR2 710 aaKnown RBP10.65□□□□□ -0.7
CCDC47-206ENST00000584112 GPR83Q9NYM4 423 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 SPATA7Q9P0W8 599 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 CRYL1Q9Y2S2 319 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 NFS1Q9Y697 457 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 FAM169AQ9Y6X4 670 aa10.65□□□□□ -0.7
CCDC47-206ENST00000584112 ZANQ9Y493 2812 aa10.65□□□□□ -0.71
CCDC47-206ENST00000584112 A0A1B0GX78 115 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 SDR42E2A6NKP2 422 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 A6NL46 340 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 GOLGA8TH3BQL2 631 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 PGRMC1O00264 195 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 DSCR3O14972 297 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 ZNF185O15231 689 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 NIPSNAP2O75323 286 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 AVILO75366 819 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 MATN4O95460 622 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 PKMP14618 531 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CHRM3P20309 590 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 ALAS2P22557 587 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 COILP38432 576 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 GRIA3P42263 894 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 MEOX1P50221 254 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 RAPSNQ13702 412 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 DHX34Q14147 1143 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 GBX1Q14549 363 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 TTLL9Q3SXZ7 439 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 NEPROQ6NW34 567 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 TTC27Q6P3X3 843 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CCDC137Q6PK04 289 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 TTLL10Q6ZVT0 673 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CAND1Q86VP6 1230 aaKnown RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CILP2Q8IUL8 1156 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CLEC1AQ8NC01 280 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 MCUQ8NE86 351 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 GRK7Q8WTQ7 553 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 NACC2Q96BF6 587 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 ZNF669Q96BR6 464 aaPredicted RBP10.64□□□□□ -0.71
CCDC47-206ENST00000584112 CCDC120Q96HB5 630 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 SELENOSQ9BQE4 189 aa10.64□□□□□ -0.71
CCDC47-206ENST00000584112 SGPP1Q9BX95 441 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms