RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 DEPDC4Q8N2C3 294 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 APIPQ96GX9 242 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 RTP3Q9BQQ7 232 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MROQ9BYG7 248 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MIEF1Q9NQG6 463 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 COQ3Q9NZJ6 369 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 DNAJC27Q9NZQ0 273 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 SLC13A4Q9UKG4 626 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 ACSL6Q9UKU0 697 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 SLC35F4A4IF30 521 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 M0QX08 132 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 HAS3O00219 553 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 PLOD3O60568 738 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 FPR1P21462 350 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 PSMD8P48556 350 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
RNF43-207ENST00000583753 SNRPD2P62316 118 aaKnown RBP10.29□□□□□ -0.76
RNF43-207ENST00000583753 VLDLRP98155 873 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MAP2K5Q13163 448 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 IHHQ14623 411 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 TBRG1Q3YBR2 411 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 DHRS4L2Q6PKH6 230 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 GHDCQ8N2G8 530 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 ZNF548Q8NEK5 533 aaPredicted RBP10.29□□□□□ -0.76
RNF43-207ENST00000583753 OR8J3Q8NGG0 315 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 ZNF675Q8TD23 568 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 SLC38A4Q969I6 547 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MMP28Q9H239 520 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 SLC6A13Q9NSD5 602 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MS4A12Q9NXJ0 267 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
RNF43-207ENST00000583753 MROH6A6NGR9 719 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 ERN1O75460 977 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 SLC10A3P09131 477 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 KDELR2P33947 212 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 SRP54P61011 504 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 ISL1P61371 349 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 IFITM3Q01628 133 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 KRR1Q13601 381 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 PCBP1Q15365 356 aaKnown RBP eCLIP10.28□□□□□ -0.764e-6■■■■■ 41.5
RNF43-207ENST00000583753 HECTD3Q5T447 861 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 SYCE2Q6PIF2 218 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 PHYKPLQ8IUZ5 450 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 BEND7Q8N7W2 519 aaPredicted RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 TPT1P8Q9HAU6 139 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 CLN6Q9NWW5 311 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 VNN3Q9NY84 501 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 HCSTQ9UBK5 93 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 MRPS7Q9Y2R9 242 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 UGT2A1Q9Y4X1 527 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 TBKBP1A7MCY6 615 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 KIAA0513O60268 411 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 AKR1A1P14550 325 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 ITIH1P19827 911 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 LIPAP38571 399 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 DAPP51397 102 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 VEPH1Q14D04 833 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 CTSL3PQ5NE16 218 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 IER5LQ5T953 404 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 ZNF691Q5VV52 312 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 USP43Q70EL4 1123 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 OR9Q2Q8NGE9 314 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 TRIT1Q9H3H1 467 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 SGK2Q9HBY8 427 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 ACOT13Q9NPJ3 140 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 TLR9Q9NR96 1032 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 DCAF13Q9NV06 445 aaKnown RBP10.28□□□□□ -0.76
RNF43-207ENST00000583753 DNAH12Q6ZR08 3092 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 ANKRD31Q8N7Z5 1873 aa10.28□□□□□ -0.76
RNF43-207ENST00000583753 OR6C70A6NIJ9 312 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 PRAMEF12O95522 483 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 RACK1P63244 317 aaKnown RBP10.27□□□□□ -0.76
RNF43-207ENST00000583753 ABHD18Q0P651 414 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 GRSF1Q12849 480 aaKnown RBP eCLIP10.27□□□□□ -0.76
RNF43-207ENST00000583753 TNFAIP8L2Q6P589 184 aaPredicted RBP10.27□□□□□ -0.76
RNF43-207ENST00000583753 TMPRSS11BQ86T26 416 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 LKAAEAR1Q8TD35 194 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 TSPEARQ8WU66 669 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 ARNT2Q9HBZ2 717 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 ATP6V1HQ9UI12 483 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 CACNA1CQ13936 2221 aa10.27□□□□□ -0.76
RNF43-207ENST00000583753 PIPSLA2A3N6 862 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 CCNDBP1O95273 360 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 OR56A5P0C7T3 313 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 CYP2A7P20853 494 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 GPC1P35052 558 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
RNF43-207ENST00000583753 C1DQ13901 141 aaKnown RBP10.27□□□□□ -0.77
RNF43-207ENST00000583753 NFE2L1Q14494 772 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 DPY19L1Q2PZI1 675 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 PTRH1Q86Y79 214 aaKnown RBP10.27□□□□□ -0.77
RNF43-207ENST00000583753 C1orf52Q8N6N3 182 aaKnown RBP10.27□□□□□ -0.77
RNF43-207ENST00000583753 GLB1L3Q8NCI6 653 aaPredicted RBP10.27□□□□□ -0.77
RNF43-207ENST00000583753 KCNJ9Q92806 393 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 DNASE1L2Q92874 299 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 TP53INP1Q96A56 240 aa10.27□□□□□ -0.77
RNF43-207ENST00000583753 CD244Q9BZW8 370 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms