RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ETV4P43268 484 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RPA4Q13156 261 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RAPSNQ13702 412 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SSPNQ14714 243 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZSCAN26Q16670 478 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GPR33Q49SQ1 333 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MROH9Q5TGP6 573 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MLIPQ5VWP3 458 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LYPLAL1Q5VWZ2 237 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RGS9BPQ6ZS82 235 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CDHR3Q6ZTQ4 885 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MAMDC2Q7Z304 686 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PIGWQ7Z7B1 504 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MRGPREQ86SM8 312 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CNPY4Q8N129 248 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PHC3Q8NDX5 983 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 OR13C4Q8NGS5 318 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TCP10LQ8TDR4 215 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MAGEB18Q96M61 343 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CPNE1Q99829 537 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C19orf43Q9BQ61 176 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 HGH1Q9BTY7 390 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 XKR8Q9H6D3 395 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C20orf96Q9NUD7 363 aaPredicted RBP9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MKS1Q9NXB0 559 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SLC17A6Q9P2U8 582 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GRID1Q9ULK0 1009 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PLLPQ9Y342 182 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 AP1M2Q9Y6Q5 423 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LRRK2Q5S007 2527 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MROH6A6NGR9 719 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TM9SF1O15321 606 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 OR2B3O76000 313 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GSTM1P09488 218 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CBSLP0DN79 551 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ARNTP27540 789 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GABRB3P28472 473 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PDHA2P29803 388 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MC4RP32245 332 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CBSP35520 551 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MAGEA12P43365 314 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF140P52738 457 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 HNRNPH2P55795 449 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GSTM4Q03013 218 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PRKG2Q13237 762 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 BMPR2Q13873 1038 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 BOP1Q14137 746 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 POU6F1Q14863 301 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MYBPC3Q14896 1274 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NR6A1Q15406 480 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PLEKHN1Q494U1 663 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 HSP90AA5PQ58FG0 334 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZRANB3Q5FWF4 1079 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TSTD2Q5T7W7 516 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SPESP1Q6UW49 350 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CNTN4Q8IWV2 1026 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ADGRF3Q8IZF5 1079 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GALNT16Q8N428 558 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CISD2Q8N5K1 135 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C19orf47Q8N9M1 422 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PPHLN1Q8NEY8 458 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PROKR1Q8TCW9 393 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ACMSDQ8TDX5 336 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TM9SF4Q92544 642 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TFGQ92734 400 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ISL2Q96A47 359 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SNRNP40Q96DI7 357 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TCTN2Q96GX1 697 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ILKAPQ9H0C8 392 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 VPS11Q9H270 941 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C12orf65Q9H3J6 166 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ASF1BQ9NVP2 202 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IL1RAPL1Q9NZN1 696 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SLC17A7Q9P2U7 560 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SLC2A6Q9UGQ3 507 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ERRFI1Q9UJM3 462 aaPredicted RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 B3GNT3Q9Y2A9 372 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PTRH2Q9Y3E5 179 aaKnown RBP9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SPTBP11277 2137 aa9.35□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TRBV5-4A0A0C4DH59 114 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ENO4A6NNW6 628 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CCL22O00626 93 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NDUFAB1O14561 156 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 KLF7O75840 302 aaPredicted RBP9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IPO13O94829 963 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 AP2A2O94973 939 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CBX6O95503 412 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LDLRP01130 860 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ALDOAP04075 364 aaKnown RBP9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 UGT2B7P16662 529 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ACRV1P26436 265 aa9.34□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SHMT2P34897 504 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms