RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF831Q5JPB2 1677 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 C10orf71Q711Q0 1435 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 KDM3AQ9Y4C1 1321 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GPR75-ASB3A0A0A6YYF3 556 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 IGKV6D-41A0A0C4DH26 115 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 A0A1B0GUA9 196 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CCDC169A6NNP5 214 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 F8VZ95 297 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 FLOT1O75955 427 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GGPS1O95749 300 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 FTCDO95954 541 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 MT-CYBP00156 380 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 AGTP01019 485 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 URODP06132 367 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 KRT5P13647 590 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GLULP15104 373 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 EZRP15311 586 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 UCHL3P15374 230 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 FERP16591 822 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CYP11B2P19099 503 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 HOXD13P35453 343 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 PGM1P36871 562 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SNX16P57768 344 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 PTENP60484 403 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 C1QTNF8P60827 252 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ELF3P78545 371 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 MRPS25P82663 173 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GTF2H2Q13888 395 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC15A2Q16348 729 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 EXOC3L4Q17RC7 722 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 KNOP1Q1ED39 458 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CCDC92Q53HC0 331 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ASPRV1Q53RT3 343 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ODF2Q5BJF6 829 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GTF2H2CQ6P1K8 395 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 PEX26Q7Z412 305 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 HOOK3Q86VS8 718 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SNX32Q86XE0 403 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 KLHL7Q8IXQ5 586 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 TEX11Q8IYF3 940 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SYT2Q8N9I0 419 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CFAP61Q8NHU2 1237 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SCFD1Q8WVM8 642 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 DYNLL2Q96FJ2 89 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 EEF2KMTQ96G04 330 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ST6GAL2Q96JF0 529 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 C17orf77Q96MU5 243 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 RUNDC3BQ96NL0 473 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ANKRD27Q96NW4 1050 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 PSMB7Q99436 277 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SYT11Q9BT88 431 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 NYXQ9GZU5 481 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 TKTL2Q9H0I9 626 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 RAB17Q9H0T7 212 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 CARD9Q9H257 536 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 NEUROG2Q9H2A3 272 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SYNCQ9H7C4 482 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SIX2Q9NPC8 291 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 HINT3Q9NQE9 182 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 C20orf141Q9NUB4 165 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 GIMAP2Q9UG22 337 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SEC63Q9UGP8 760 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 PCYOX1Q9UHG3 505 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 ODF2LQ9ULJ1 636 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 HSF4Q9ULV5 492 aa3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 UTP11Q9Y3A2 253 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-208ENST00000583344 SCN7AQ01118 1682 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PLIN4Q96Q06 1357 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 MIF4GDA9UHW6 222 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC37A4O43826 429 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 CALUO43852 315 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PTP4A3O75365 173 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 TSPAN9O75954 239 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 ATP6V1G2O95670 118 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PLA2G4BP0C869 781 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PDHBP11177 359 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 RARGP13631 454 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PORP16435 677 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 MUTP22033 750 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 CTNNA2P26232 953 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 RPA1P27694 616 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 TMOD1P28289 359 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 NF2P35240 595 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 HOXA1P49639 335 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 RAD23BP54727 409 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 GALCP54803 685 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 SLC12A3P55017 1021 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 MAGOHP61326 146 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 RPP30P78346 268 aaKnown RBP3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 KLRC3Q07444 240 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 BNIP1Q12981 228 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 CHAF1BQ13112 559 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 MAMLD1Q13495 774 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 ITPK1Q13572 414 aa3.81□□□□□ -1.8
SMCHD1-208ENST00000583344 GIT2Q14161 759 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms