RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 HKDC1Q2TB90 917 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 FBXO42Q6P3S6 717 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 RPTNQ6XPR3 784 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 PPP1R21Q6ZMI0 780 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 ZNF295-AS1Q8N0V1 137 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 SKA2Q8WVK7 121 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-221ENST00000583080 ATG4AQ8WYN0 398 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 DPH7Q9BTV6 452 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 YIPF2Q9BWQ6 316 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 CHST11Q9NPF2 352 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 RIMKLBQ9ULI2 386 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-221ENST00000583080 RUVBL1Q9Y265 456 aaKnown RBP15.35■□□□□ 0.05
SREBF1-221ENST00000583080 REXO2Q9Y3B8 237 aaKnown RBP15.35■□□□□ 0.05
SREBF1-221ENST00000583080 TCAF1Q9Y4C2 921 aa15.35■□□□□ 0.05
SREBF1-221ENST00000583080 NCOA6Q14686 2063 aaPredicted RBP15.35■□□□□ 0.05
SREBF1-221ENST00000583080 LOC102723996A0A087X1L8 192 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 OR5H15A6NDH6 313 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 SOWAHDA6NJG2 315 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 PRMT5O14744 637 aaPredicted RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 CRYABP02511 175 aaKnown RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 PTMAP06454 111 aaKnown RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 HEXBP07686 556 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 ADRA1DP25100 572 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 SNRPNP63162 240 aaKnown RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 C3AR1Q16581 482 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 PTRHD1Q6GMV3 140 aaKnown RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 TTC23LQ6PF05 361 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 RIPOR1Q6ZS17 1223 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 NEK10Q6ZWH5 1172 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 ZC3H7AQ8IWR0 971 aaKnown RBP15.34■□□□□ 0.05
SREBF1-221ENST00000583080 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 CSNK1A1LQ8N752 337 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 LACRTQ9GZZ8 138 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 RNF32Q9H0A6 362 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 P2RY12Q9H244 342 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 CATSPERZQ9NTU4 200 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 C14orf105Q9NVL8 296 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 TINAGQ9UJW2 476 aa15.34■□□□□ 0.05
SREBF1-221ENST00000583080 IGKV1-8A0A0C4DH67 115 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 SLC19A2O60779 497 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 PRAMEF2O60811 474 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 SUN1O94901 812 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 GAS8O95995 478 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 CYLC1P35663 651 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-221ENST00000583080 KRTAP10-9P60411 292 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 ZNF33BQ06732 778 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.33■□□□□ 0.04
SREBF1-221ENST00000583080 AARS2Q5JTZ9 985 aaKnown RBP15.33■□□□□ 0.04
SREBF1-221ENST00000583080 CTSL3PQ5NE16 218 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 MTFR2Q6P444 385 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 PRUNE1Q86TP1 453 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 SHISA5Q8N114 240 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 ARHGEF39Q8N4T4 335 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 RAB42Q8N4Z0 105 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 DNAJB8Q8NHS0 232 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 GSDMBQ8TAX9 411 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 MMABQ96EY8 250 aaPredicted RBP15.33■□□□□ 0.04
SREBF1-221ENST00000583080 ZNF700Q9H0M5 742 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 SPATA7Q9P0W8 599 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 CACNA1CQ13936 2221 aa15.33■□□□□ 0.04
SREBF1-221ENST00000583080 TACC2O95359 2948 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 A0A0A6YYC8 382 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 ERI2A8K979 691 aaKnown RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 I3L1I5 382 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 P2RX6O15547 441 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 FOXS1O43638 330 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 CMPK1P30085 196 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 SLC26A3P40879 764 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 MAT1AQ00266 395 aaKnown RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 ABHD17BQ5VST6 288 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 TMEM205Q6UW68 189 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 SUSD1Q6UWL2 747 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 NCCRP1Q6ZVX7 275 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 OTOAQ7RTW8 1153 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 PAQR7Q86WK9 346 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 FAM136AQ96C01 138 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 IMMP1LQ96LU5 166 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 PANX3Q96QZ0 392 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 PLCD4Q9BRC7 762 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 MKKSQ9NPJ1 570 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 GNPTGQ9UJJ9 305 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 CDC14AQ9UNH5 594 aa15.32■□□□□ 0.04
SREBF1-221ENST00000583080 SETD2Q9BYW2 2564 aaPredicted RBP15.32■□□□□ 0.04
SREBF1-221ENST00000583080 HEATR5BQ9P2D3 2071 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 IGHV3-20A0A0C4DH32 117 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 CD3EAPO15446 510 aaKnown RBP15.31■□□□□ 0.04
SREBF1-221ENST00000583080 PRPF4O43172 522 aaKnown RBP eCLIP15.31■□□□□ 0.04
SREBF1-221ENST00000583080 VPS26AO75436 327 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 ERGP11308 486 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 ETS1P14921 441 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 PPARGP37231 505 aaPredicted RBP15.31■□□□□ 0.04
SREBF1-221ENST00000583080 CCNFP41002 786 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 TTPAP49638 278 aa15.31■□□□□ 0.04
SREBF1-221ENST00000583080 ST13P50502 369 aaKnown RBP15.31■□□□□ 0.04
SREBF1-221ENST00000583080 EMP3P54852 163 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms