RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FTCDO95954 541 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 TNFSF10P50591 281 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 DSG2Q14126 1118 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 SEMA3AQ14563 771 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 VWA2Q5GFL6 755 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
MKS1-209ENST00000580127 GARNL3Q5VVW2 1013 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 FBXO42Q6P3S6 717 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 LDB1Q86U70 411 aaPredicted RBP17.05■□□□□ 0.32
MKS1-209ENST00000580127 ATG4AQ8WYN0 398 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 NR4A3Q92570 626 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 HES6Q96HZ4 224 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 TCF12Q99081 682 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 TRIM56Q9BRZ2 755 aaKnown RBP17.05■□□□□ 0.32
MKS1-209ENST00000580127 MRPS30Q9NP92 439 aaKnown RBP17.05■□□□□ 0.32
MKS1-209ENST00000580127 CHST11Q9NPF2 352 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 KLF2Q9Y5W3 355 aaPredicted RBP17.05■□□□□ 0.32
MKS1-209ENST00000580127 ABCA12Q86UK0 2595 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 TCRBV7S2A1N4TA0A589 114 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 ATP5DP30049 168 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 GRIA1P42261 906 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 EIF3BP55884 814 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 SESN2P58004 480 aaPredicted RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 ARHGAP19Q14CB8 494 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 OASLQ15646 514 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 ABHD17BQ5VST6 288 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 RAD9BQ6WBX8 426 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 RNF44Q7L0R7 432 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 RNF10Q8N5U6 811 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 ACRBPQ8NEB7 543 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 OR9A1PQ8NGU1 263 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 LKAAEAR1Q8TD35 194 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 BRIX1Q8TDN6 353 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 METTL21AQ8WXB1 218 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 C8orf44Q96CB5 159 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 MMABQ96EY8 250 aaPredicted RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 EBNA1BP2Q99848 306 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 BAG1Q99933 345 aaPredicted RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 P2RY12Q9H244 342 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 PLA2G3Q9NZ20 509 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 STMN3Q9NZ72 180 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 REXO2Q9Y3B8 237 aaKnown RBP17.04■□□□□ 0.32
MKS1-209ENST00000580127 NFS1Q9Y697 457 aa17.04■□□□□ 0.32
MKS1-209ENST00000580127 OR2A25A4D2G3 310 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 H0YGG7 62 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 RASAL1O95294 804 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 MLYCDO95822 493 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 CHRM3P20309 590 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 PSMB5P28074 263 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 BDKRB1P46663 353 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 ARF3P61204 181 aaPredicted RBP17.03■□□□□ 0.32
MKS1-209ENST00000580127 RELAQ04206 551 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 TSTA3Q13630 321 aaPredicted RBP17.03■□□□□ 0.32
MKS1-209ENST00000580127 NDUFA9Q16795 377 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 PRTGQ2VWP7 1150 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 ZNF324BQ6AW86 544 aaPredicted RBP17.03■□□□□ 0.32
MKS1-209ENST00000580127 LAPTM4BQ86VI4 370 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 MCEMP1Q8IX19 187 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 CSNK1A1LQ8N752 337 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 PLCD4Q9BRC7 762 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 ACAT2Q9BWD1 397 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 TSGA10Q9BZW7 698 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 TGIF2Q9GZN2 237 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 RNF32Q9H0A6 362 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 EIF2B3Q9NR50 452 aaKnown RBP17.03■□□□□ 0.32
MKS1-209ENST00000580127 MARCH4Q9P2E8 410 aaPredicted RBP17.03■□□□□ 0.32
MKS1-209ENST00000580127 CROCCQ5TZA2 2017 aa17.03■□□□□ 0.32
MKS1-209ENST00000580127 TRGV8A0A0C4DH27 118 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 MATN4O95460 622 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 ESR1P03372 595 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 CATP04040 527 aaKnown RBP17.02■□□□□ 0.32
MKS1-209ENST00000580127 COX6A1P12074 109 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 SOX11P35716 441 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 ZNF75DP51815 510 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 SNX1Q13596 522 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 SIRT6Q8N6T7 355 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 MCOLN3Q8TDD5 553 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 C1orf54Q8WWF1 131 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 PSMF1Q92530 271 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 TUBB6Q9BUF5 446 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 ABI3Q9P2A4 366 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 SEC14L3Q9UDX4 400 aa17.02■□□□□ 0.32
MKS1-209ENST00000580127 IGHV1-45A0A0A0MS14 117 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 A0A1W2PPV9 198 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 A0A1W2PQ72 361 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 E5RI56 91 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 CCL21O00585 134 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 UNC5CO95185 931 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 VAPBO95292 243 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 EZRP15311 586 aaKnown RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 FMO4P31512 558 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 SLC26A3P40879 764 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 AVPR1BP47901 424 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 KCNK10P57789 538 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 ABATP80404 500 aa17.01■□□□□ 0.31
MKS1-209ENST00000580127 SARNPP82979 210 aaKnown RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 PRDX1Q06830 199 aaKnown RBP17.01■□□□□ 0.31
MKS1-209ENST00000580127 FAM53BQ14153 422 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms