RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 CDC14AQ9UNH5 594 aa18.29■□□□□ 0.52
CDKN2A-213ENST00000579122 ZGRF1Q86YA3 2104 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 PRPF4O43172 522 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 LIASO43766 372 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 BMP10O95393 424 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 FTCDO95954 541 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 IFNB1P01574 187 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 RPS3P23396 243 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 CXCR2P25025 360 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 EMP2P54851 167 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 KCNK10P57789 538 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 ART3Q13508 389 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 DSG2Q14126 1118 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 PRTGQ2VWP7 1150 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 PCID2Q5JVF3 399 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 FBXO42Q6P3S6 717 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 CNSTQ6PJW8 725 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 LAPTM4BQ86VI4 370 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 MCEMP1Q8IX19 187 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 MPP5Q8N3R9 675 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 MVB12AQ96EY5 273 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 HES6Q96HZ4 224 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 CABS1Q96KC9 395 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 CHRAC1Q9NRG0 131 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 RAB6BQ9NRW1 208 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 C14orf105Q9NVL8 296 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 PLA2G3Q9NZ20 509 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 STOX2Q9P2F5 926 aaPredicted RBP18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 MRPS2Q9Y399 296 aaKnown RBP18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 KLF2Q9Y5W3 355 aaPredicted RBP18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 CSMD2Q7Z408 3487 aa18.28■□□□□ 0.52
CDKN2A-213ENST00000579122 FBN2P35556 2912 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 IGHV1-45A0A0A0MS14 117 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 KRT87PA6NCN2 255 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 IDSB3KWA1 339 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 PHF2O75151 1096 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 APRTP07741 180 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 CMPK1P30085 196 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 RIPOR1Q6ZS17 1223 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 PHF12Q96QT6 1004 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 DPH7Q9BTV6 452 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 RIC8BQ9NVN3 520 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 ZNF148Q9UQR1 794 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 RUVBL2Q9Y230 463 aaKnown RBP18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 SVILO95425 2214 aa18.27■□□□□ 0.52
CDKN2A-213ENST00000579122 ESPNB1AK53 854 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 H0YGG7 62 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 VPS26AO75436 327 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 NDUFS3O75489 264 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 WFS1O76024 890 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 ARF3P61204 181 aaPredicted RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 YBX1P67809 324 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 EEF1A2Q05639 463 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 FASTKQ14296 549 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 GFRALQ6UXV0 394 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 RNF10Q8N5U6 811 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 SIRT6Q8N6T7 355 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 TGIF2Q9GZN2 237 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 RNF32Q9H0A6 362 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 TREX1Q9NSU2 369 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 TRPC4Q9UBN4 977 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 SUCOQ9UBS9 1254 aaKnown RBP18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 PDZD2O15018 2839 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 AKAP9Q99996 3911 aa18.26■□□□□ 0.51
CDKN2A-213ENST00000579122 MATN4O95460 622 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 HEXBP07686 556 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ERGP11308 486 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ATP5DP30049 168 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 SLC26A3P40879 764 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 AP2B1P63010 937 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 CTSL3PQ5NE16 218 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 GARNL3Q5VVW2 1013 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 CSNK1A1LQ8N752 337 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 DNAJB8Q8NHS0 232 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ITLN2Q8WWU7 325 aaPredicted RBP18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 PLCD4Q9BRC7 762 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ACAT2Q9BWD1 397 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 YIPF2Q9BWQ6 316 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 MKKSQ9NPJ1 570 aaPredicted RBP18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 PAK5Q9P286 719 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ABI3Q9P2A4 366 aa18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 RUVBL1Q9Y265 456 aaKnown RBP18.25■□□□□ 0.51
CDKN2A-213ENST00000579122 ANKRD17O75179 2603 aaKnown RBP18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 LOC102723996A0A087X1L8 192 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 CRYABP02511 175 aaKnown RBP18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 UQCRHP07919 91 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 ICAM2P13598 275 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 ETS1P14921 441 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 POU3F2P20265 443 aaPredicted RBP18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 EIF3BP55884 814 aaKnown RBP18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 GBX1Q14549 363 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 ANKRD20A4Q4UJ75 823 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 MTFR2Q6P444 385 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 PRUNE1Q86TP1 453 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 PAQR7Q86WK9 346 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 AMER3Q8N944 861 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 CCDC89Q8N998 374 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 OR9A1PQ8NGU1 263 aa18.24■□□□□ 0.51
CDKN2A-213ENST00000579122 SMPDL3AQ92484 453 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms