RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CCL11P51671 97 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PGGT1BP53609 377 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 POLE2P56282 527 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 AP1S2P56377 157 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TAS2R39P59534 338 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 ARF3P61204 181 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 POU4F1Q01851 419 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TAP2Q03519 686 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 OCA2Q04671 838 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 NFATC3Q12968 1075 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 KCNAB2Q13303 367 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 CSHL1Q14406 222 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 KBTBD12Q3ZCT8 623 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 GLE1Q53GS7 698 aaKnown RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 GRTP1Q5TC63 336 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 YOD1Q5VVQ6 348 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 LCN10Q6JVE6 187 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 CAPN13Q6MZZ7 669 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 RHBDD2Q6NTF9 364 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 FBXO42Q6P3S6 717 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 CYS1Q717R9 158 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF605Q86T29 641 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 SPNS2Q8IVW8 549 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 MMGT1Q8N4V1 131 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 METTL27Q8N6F8 245 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 FBF1Q8TES7 1133 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 THAP4Q8WY91 577 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TTC9Q92623 222 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PTERQ96BW5 349 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PDLIM5Q96HC4 596 aaKnown RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 RUFY1Q96T51 708 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 OLFM1Q99784 485 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 ZFYVE21Q9BQ24 234 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PLCD4Q9BRC7 762 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 WDR83Q9BRX9 315 aaKnown RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 HAUS8Q9BT25 410 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 CAB39LQ9H9S4 337 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PLAC1Q9HBJ0 212 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 LRRC4CQ9HCJ2 640 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 ACSS2Q9NR19 701 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TMEM184CQ9NVA4 438 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 STOX2Q9P2F5 926 aaPredicted RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TLK1Q9UKI8 766 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 TCFL5Q9UL49 500 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 CDC14AQ9UNH5 594 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 MTO1Q9Y2Z2 717 aaKnown RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 PTRH2Q9Y3E5 179 aaKnown RBP6.28□□□□□ -1.4
TRAF4-213ENST00000578917 MYO18BQ8IUG5 2567 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
TRAF4-213ENST00000578917 HELZ2Q9BYK8 2649 aaKnown RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 A0A1W2PPV9 198 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 ARGFXA6NJG6 315 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 A6NL46 340 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CXorf49A8MYA2 514 aaPredicted RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CDC7O00311 574 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 DSCR3O14972 297 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 H2AFYO75367 372 aaKnown RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 S100BP04271 92 aaPredicted RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 SERPIND1P05546 499 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 ANXA5P08758 320 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 ENO2P09104 434 aaPredicted RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CCDC166P0CW27 439 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 EZRP15311 586 aaKnown RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 IMPA1P29218 277 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 RORAP35398 523 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 GP5P40197 560 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 OR1D4P47884 311 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CCR8P51685 355 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 RRADP55042 308 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 TBPL1P62380 186 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 YBX1P67809 324 aaKnown RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 NFKB2Q00653 900 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 TIAL1Q01085 375 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF460Q14592 562 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 SLMAPQ14BN4 828 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 NCF4Q15080 339 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 NDUFA9Q16795 377 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 PHKG1Q16816 387 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 UGT8Q16880 541 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 MUM1Q2TAK8 710 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 LINC00303Q3SY05 128 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CRTC2Q53ET0 693 aaPredicted RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 PRAMEF13Q5VWM6 474 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 FRMPD2BQ6IN97 320 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 MBOAT1Q6ZNC8 495 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 OVCH1Q7RTY7 1134 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 PRICKLE2Q7Z3G6 844 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 TBC1D1Q86TI0 1168 aaPredicted RBP6.27□□□□□ -1.41
TRAF4-213ENST00000578917 GPSM1Q86YR5 675 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 RAB43Q86YS6 212 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 PLD3Q8IV08 490 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 CEP97Q8IW35 865 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 IFT20Q8IY31 132 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 PRSS58Q8IYP2 241 aa6.27□□□□□ -1.41
TRAF4-213ENST00000578917 OR4N4Q8N0Y3 316 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms