RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PHF21BQ96EK2 531 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CNDP1Q96KN2 507 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 ZNF587Q96SQ5 575 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 EGFL8Q99944 293 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 DRC3Q9H069 523 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 SLC32A1Q9H598 525 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 CCDC86Q9H6F5 360 aaKnown RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 CAAP1Q9H8G2 361 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 MANSC1Q9H8J5 431 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 MLXIPLQ9NP71 852 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 NLGN3Q9NZ94 848 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 OR6C2Q9NZP2 312 aa7.75□□□□□ -1.17
COPS3-215ENST00000578317 STOX2Q9P2F5 926 aaPredicted RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 CFAP20Q9Y6A4 193 aaKnown RBP7.75□□□□□ -1.17
COPS3-215ENST00000578317 WDR91A4D1P6 747 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SRRM3A6NNA2 597 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PROB1E7EW31 1015 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 K7EPI3 171 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 E2F3O00716 465 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 MLYCDO95822 493 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 LMNAP02545 664 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 RPS17P08708 135 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 ALPPL2P10696 532 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 PIK3CGP48736 1102 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 PNLIPRP1P54315 467 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GUCY1A3Q02108 690 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 STX3Q13277 289 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SUZ12Q15022 739 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PTCHD3Q3KNS1 767 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 UNC50Q53HI1 259 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ZCCHC8Q6NZY4 707 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 LRFN4Q6PJG9 635 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 LRRC70Q7Z2Q7 622 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ARL10Q8N8L6 244 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 OR6C4Q8NGE1 309 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 OR52E1Q8NGJ3 308 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 OR2L8Q8NGY9 312 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 OR4C6Q8NH72 309 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 LRRC8CQ8TDW0 803 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 DYDC1Q8WWB3 177 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ATOH1Q92858 354 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 TMEM237Q96Q45 408 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 MIPEPQ99797 713 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 MECRQ9BV79 373 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SGPP1Q9BX95 441 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CAPS2Q9BXY5 557 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PCBD2Q9H0N5 130 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 STN1Q9H668 368 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 THAP1Q9NVV9 213 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GMEB2Q9UKD1 530 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ADAM21Q9UKJ8 722 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SPAG17Q6Q759 2223 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 hCG_2014768A0A024R1R8 64 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NCF1BA6NI72 391 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 NCF1CA8MVU1 366 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 TMEM114B3SHH9 223 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 POLR3GO15318 223 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 NUDT21O43809 227 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PRICKLE3O43900 615 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 SDC3O75056 442 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SNNO75324 88 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 KATNA1O75449 491 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SUPT7LO94864 414 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SIX3O95343 332 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 FGF4P08620 206 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NCF1P14598 390 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PNLIPP16233 465 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GLB1P16278 677 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NPPBP16860 134 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 BGNP21810 368 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 EEF1DP29692 281 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 SHMT2P34897 504 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GPR3P46089 330 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 BDKRB1P46663 353 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 AGTR2P50052 363 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ATXN3P54252 364 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 HHEXQ03014 270 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NAE1Q13564 534 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 E2F2Q14209 437 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NR1D2Q14995 579 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CHI3L2Q15782 390 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CSRP2Q16527 193 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 DEFB133Q30KQ1 61 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 C14orf28Q4W4Y0 310 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CFAP157Q5JU67 520 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CAPN13Q6MZZ7 669 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 DUS1LQ6P1R4 473 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 TMEM26Q6ZUK4 368 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 FRMD7Q6ZUT3 714 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 TAX1BP1Q86VP1 789 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 AMIGO1Q86WK6 493 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 TRIM48Q8IWZ4 208 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 KIRREL3Q8IZU9 778 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 CHCHD4Q8N4Q1 142 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 ZNF483Q8TF39 744 aaPredicted RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 PATE1Q8WXA2 126 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SMPDL3AQ92484 453 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 SLC22A18Q96BI1 424 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms