RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NCSTNQ92542 709 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TMEM125Q96AQ2 219 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MOCOSQ96EN8 888 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 NSUN5Q96P11 429 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SLC7A5P2Q9GIP4 190 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 C20orf27Q9GZN8 174 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 NSUN3Q9H649 340 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PI15O43692 258 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 H1F0P07305 194 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 DSTNP60981 165 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 FKBP1BP68106 108 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PITX1P78337 314 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CD47Q08722 323 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 KCNA10Q16322 511 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RAB6CQ53S08 254 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 C10orf62Q5T681 223 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CXorf57Q6NSI4 855 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CHADLQ6NUI6 762 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PNCKQ6P2M8 343 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PAMR1Q6UXH9 720 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MSANTD1Q6ZTZ1 278 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 IGFN1Q86VF2 1251 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ZSWIM9Q86XI8 627 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PHYKPLQ8IUZ5 450 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SLC43A3Q8NBI5 491 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 COL26A1Q96A83 441 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TMEM80Q96HE8 168 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SLC35A5Q9BS91 424 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RAB6CQ9H0N0 254 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 GSTO2Q9H4Y5 243 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RIMKLBQ9ULI2 386 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 KRBA1A5PL33 1030 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 GPX3P22352 226 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 KDELR2P33947 212 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 OPRL1P41146 370 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 HNRNPFP52597 415 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 INHBEP58166 350 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 DCDC1P59894 354 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RPP38P78345 283 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CD83Q01151 205 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 BTG3Q14201 252 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CYBRD1Q53TN4 286 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MS4A13Q5J8X5 152 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 OAFQ86UD1 273 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 KLHL36Q8N4N3 616 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 BEND7Q8N7W2 519 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 NAT16Q8N8M0 369 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ANKRD49Q8WVL7 239 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SMG7Q92540 1137 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TBC1D17Q9HA65 648 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TRBC2A0A5B9 178 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RIIAD1A6NNX1 92 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SEMA3DO95025 777 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 OR6A2O95222 327 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RPL4P36578 427 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 GMPRP36959 345 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RGS1Q08116 209 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RBBP4Q09028 425 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ST3GAL4Q11206 333 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 NPRL3Q12980 569 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SP140Q13342 867 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 ADAM15Q13444 863 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CBX2Q14781 532 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 FNDC3BQ53EP0 1204 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CRB2Q5IJ48 1285 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 KHDRBS2Q5VWX1 349 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MEDAGQ5VYS4 303 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CNTN4Q8IWV2 1026 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 NPAS3Q8IXF0 933 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 TMEM102Q8N9M5 508 aaPredicted RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 IL4I1Q96RQ9 567 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PDCD10Q9BUL8 212 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 LMAN2LQ9H0V9 348 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
PTPRM-205ENST00000577827 PCDHGB5Q9Y5G0 923 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 IRS2Q9Y4H2 1338 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 A0A1W2PRG6 482 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 IQCF5A8MTL0 148 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 C1QTNF3-AMACRE9PGA6 284 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 PDPK1O15530 556 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 PEX10O60683 326 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 CPNE3O75131 537 aaKnown RBP10.09□□□□□ -0.79
PTPRM-205ENST00000577827 XYLBO75191 536 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 SERPINA3P01011 423 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 GUCA1AP43080 201 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-205ENST00000577827 MAP2K4P45985 399 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 SMSP52788 366 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 CRISP3P54108 245 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 PRR5P85299 388 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 KCNC4Q03721 635 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 TBRG1Q3YBR2 411 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 LARP4Q71RC2 724 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPRM-205ENST00000577827 SUSD6Q92537 303 aa10.09□□□□□ -0.79
PTPRM-205ENST00000577827 SH3YL1Q96HL8 342 aaPredicted RBP10.09□□□□□ -0.79
PTPRM-205ENST00000577827 ASPNQ9BXN1 380 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms