RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MAPKAPK5-AS1Q8N8E1 139 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 NAT8LQ8N9F0 302 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 WDSUB1Q8N9V3 476 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ZNF383Q8NA42 475 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 DDHD1Q8NEL9 900 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 CTCFLQ8NI51 663 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 METTL21AQ8WXB1 218 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 TMEM190Q8WZ59 177 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 NR4A3Q92570 626 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ARHGAP45Q92619 1136 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 KRT35Q92764 455 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ZNF524Q96C55 264 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 OTUB1Q96FW1 271 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 FAM71F1Q96KD3 344 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 CCDC43Q96MW1 224 aaKnown RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 NKX3-1Q99801 234 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 TRIM51Q9BSJ1 452 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 NACAP1Q9BZK3 213 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 S1PR5Q9H228 398 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 P2RY12Q9H244 342 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SNX25Q9H3E2 840 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 Q9N2K0 584 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 MYNNQ9NPC7 610 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SIX2Q9NPC8 291 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 P4HTMQ9NXG6 502 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ERAP1Q9NZ08 941 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 PKD2L2Q9NZM6 624 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 VPS18Q9P253 973 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SLC12A6Q9UHW9 1150 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 DAPK2Q9UIK4 370 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 CHKBQ9Y259 395 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 A0A087WW49 117 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 IQCMA0A1B0GVH7 501 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 A0A1W2PPM1 405 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 A0A1W2PPW3 197 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 FEZF1A0PJY2 475 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 BICDL2A1A5D9 508 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 TMEM150CB9EJG8 249 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 RTCAO00442 366 aaKnown RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 ZNF263O14978 683 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 EXTL3O43909 919 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 MT-ND3P03897 115 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 GBAP04062 536 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 SMIM18P0DKX4 95 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 CEBPBP17676 345 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ALDH4A1P30038 563 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 SFTPDP35247 375 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 TCF7P36402 384 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 WNT5AP41221 380 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 HNF4AP41235 474 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 KCNJ1P48048 391 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 RGS7P49802 495 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 MFAP3P55082 362 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 UBXN1Q04323 297 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 DMPKQ09013 629 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 HYAL1Q12794 435 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 PTK6Q13882 451 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 TUBB2AQ13885 445 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 RCN2Q14257 317 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 OPCMLQ14982 345 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ZNF674Q2M3X9 581 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ODF2Q5BJF6 829 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 XKR6Q5GH73 641 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 CCDC158Q5M9N0 1113 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 GFI1BQ5VTD9 330 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 FAM91A1Q658Y4 838 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ADAM5Q6NVV9 412 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 PRSS55Q6UWB4 352 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 Q6ZTC4 211 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 SPATA19Q7Z5L4 167 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 APLFQ8IW19 511 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 CCDC60Q8IWA6 550 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 SYCP3Q8IZU3 236 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 CNPY4Q8N129 248 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 EID3Q8N140 333 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 PRSS35Q8N3Z0 413 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 FAM89BQ8N5H3 189 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ANKRD13CQ8N6S4 541 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ZNF248Q8NDW4 579 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 GPRC5AQ8NFJ5 357 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 DBF4BQ8NFT6 615 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 OR5AP2Q8NGF4 316 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 OR5T2Q8NGG2 359 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 OR10G8Q8NGN5 311 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 CHURC1Q8WUH1 139 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 ZNRF4Q8WWF5 429 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 HPSE2Q8WWQ2 592 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 TSACCQ96A04 125 aaPredicted RBP2.28□□□□□ -2.04
COPS3-213ENST00000577210 MAGED4Q96JG8 741 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 LRR1Q96L50 414 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 INTS14Q96SY0 518 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 KRT12Q99456 494 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 MAP3K3Q99759 626 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 KATNB1Q9BVA0 655 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 TUBB2BQ9BVA1 445 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 OR2B2Q9GZK3 357 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 DNAI2Q9GZS0 605 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 C2orf40Q9H1Z8 148 aa2.28□□□□□ -2.04
COPS3-213ENST00000577210 Q9H8V8 135 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms