RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TMEM79Q9BSE2 394 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 DPH7Q9BTV6 452 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SARGQ9BW04 601 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 ACAT2Q9BWD1 397 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 TRIM55Q9BYV6 548 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 AICDAQ9GZX7 198 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CCDC68Q9H2F9 335 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 CDC42EP4Q9H3Q1 356 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 PARVBQ9HBI1 364 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 STARD5Q9NSY2 213 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 INTS7Q9NVH2 962 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ANKMY1Q9P2S6 941 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 PADI1Q9ULC6 663 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SLC39A10Q9ULF5 831 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 PLCL2Q9UPR0 1127 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
SMG6-216ENST00000575176 ASB1Q9Y576 335 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 KCNMB2Q9Y691 235 aa8.3□□□□□ -1.08
SMG6-216ENST00000575176 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 SCN2AQ99250 2005 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 C4orf51C9J302 202 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 K7EM74 188 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TK2O00142 265 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PHGDHO43175 533 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 KDM1AO60341 852 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TBX6O95947 436 aaPredicted RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 MT-ND3P03897 115 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PDGFAP04085 211 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PRKAR1AP10644 381 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 NPPBP16860 134 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TCN2P20062 427 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 CYP2A7P20853 494 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 GP5P40197 560 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 KCNC1P48547 511 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 CSNK1G2P78368 415 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 E2F2Q14209 437 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 OR4D1Q15615 310 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TSNQ15631 228 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 SF1Q15637 639 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 HKDC1Q2TB90 917 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 C18orf21Q32NC0 220 aaPredicted RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 PRAMEF13Q5VWM6 474 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 AGTRAPQ6RW13 159 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PLD3Q8IV08 490 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 AMER3Q8N944 861 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 OR4K1Q8NGD4 311 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PROKR1Q8TCW9 393 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 MAGEC3Q8TD91 643 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 SLC39A7Q92504 469 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PYCR2Q96C36 320 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TM4SF19Q96DZ7 209 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 FOPNLQ96NB1 174 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 CPNE1Q99829 537 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 ZFYVE21Q9BQ24 234 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 NLNQ9BYT8 704 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 FAM117AQ9C073 453 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 SLC26A1Q9H2B4 701 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 ACSS3Q9H6R3 686 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 FANCEQ9HB96 536 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 CTSFQ9UBX1 484 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 TCFL5Q9UL49 500 aa8.29□□□□□ -1.08
SMG6-216ENST00000575176 RUVBL1Q9Y265 456 aaKnown RBP8.29□□□□□ -1.08
SMG6-216ENST00000575176 LRRK2Q5S007 2527 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 NBPF19A0A087WUL8 3843 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 A0A0J9YVX5 310 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 A0A1B0GX78 115 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 VSTM2BA6NLU5 285 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 H0YGG7 62 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 KIF2AO00139 706 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 DSCR3O14972 297 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 TAPBPO15533 448 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 FOXS1O43638 330 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ZBTB14O43829 449 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 CEACAM4O75871 244 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ALDOAP04075 364 aaKnown RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 TUBB4AP04350 444 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ENO2P09104 434 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 MTHFD2P13995 350 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 EZRP15311 586 aaKnown RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 CD1DP15813 335 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 HSD17B2P37059 387 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 BCL6P41182 706 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ARL4DP49703 201 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PMS2P54278 862 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 POLE2P56282 527 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 AP1S2P56377 157 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 VSX2P58304 361 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 IL2P60568 153 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 ARF3P61204 181 aaPredicted RBP8.28□□□□□ -1.08
SMG6-216ENST00000575176 CDKL1Q00532 357 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 POU4F1Q01851 419 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 HYAL2Q12891 473 aa8.28□□□□□ -1.08
SMG6-216ENST00000575176 PDAP1Q13442 181 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms