RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ERVW-1Q9UQF0 538 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ERVK-11Q9UQG0 969 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 HSPE1-MOB4S4R3N1 261 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 TRAV19A0A0A6YYK7 116 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 A0A1W2PQ67 120 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KRT87PA6NCN2 255 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 PABPN1LA6NDY0 278 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF99A8MXY4 864 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 PTGES3LE9PB15 166 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KPNA5O15131 536 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 UGDHO60701 494 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZBTB11O95625 1053 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF682O95780 498 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 UGT2B4P06133 528 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 TFPTP0C1Z6 253 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF12P17014 697 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 JUNDP17535 347 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CD22P20273 847 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KDELR2P33947 212 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 IL5RAQ01344 420 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 LRRC73Q5JTD7 316 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CAPN13Q6MZZ7 669 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ERICH5Q6P6B1 374 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CRTC3Q6UUV7 619 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CBLL1Q75N03 491 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GALNT5Q7Z7M9 940 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SYT12Q8IV01 421 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SLC15A4Q8N697 577 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SETD9Q8NE22 299 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 OR8J2Q8NGG1 315 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CNIH3Q8TBE1 160 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 FAR1Q8WVX9 515 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 VWCEQ96DN2 955 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 PANX1Q96RD7 426 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 DGCR6LQ9BY27 220 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SPATA6Q9NWH7 488 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SPG21Q9NZD8 308 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 SLC25A13Q9UJS0 675 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 RPS6KA6Q9UK32 745 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 AXIN1O15169 862 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 NDUFS2O75306 463 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 AP2A2O94973 939 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ANGPTL1O95841 491 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 FTH1P02794 183 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 FABP3P05413 133 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ACVR2AP27037 513 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CD6P30203 668 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CXCR4P61073 352 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GSTM4Q03013 218 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 ACOX1Q15067 660 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CTF1Q16619 201 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 LAIR1Q6GTX8 287 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GALNT18Q6P9A2 607 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CNKSR3Q6P9H4 555 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 GDPD4Q6W3E5 623 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 EIF3MQ7L2H7 374 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 TMCO2Q7Z6W1 182 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 B3GNT8Q7Z7M8 397 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 KLHDC8AQ8IYD2 350 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 REM2Q8IYK8 340 aaPredicted RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 DDHD1Q8NEL9 900 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 EMILIN2Q9BXX0 1053 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 DUSP21Q9H596 190 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 RC3H2Q9HBD1 1191 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 FAM120CQ9NX05 1096 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 LMCD1Q9NZU5 365 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 WARS2Q9UGM6 360 aaKnown RBP8.67□□□□□ -1.02
NCBP3-204ENST00000574911 CORINQ9Y5Q5 1042 aa8.67□□□□□ -1.02
NCBP3-204ENST00000574911 MAGEB17A8MXT2 336 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 WASH3PC4AMC7 463 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 E9PQ18 207 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 YY2O15391 372 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 XPNPEP2O43895 674 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 CBFA2T3O75081 653 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 XYLBO75191 536 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 MTX2O75431 263 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 JRKO75564 520 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SLCO2B1O94956 709 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 EPN2O95208 641 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 GSTM1P09488 218 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 GJA1P17302 382 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 LAG3P18627 525 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 FPR1P21462 350 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ARHGDIAP52565 204 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 IRF8Q02556 426 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 EMX1Q04741 257 aaPredicted RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 GTF2H3Q13889 308 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 LAPTM4AQ15012 233 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ZNF621Q6ZSS3 439 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ANKRD33Q7Z3H0 272 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 PIWIL3Q7Z3Z3 882 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 THOC6Q86W42 341 aaKnown RBP8.66□□□□□ -1.02
NCBP3-204ENST00000574911 EGFL6Q8IUX8 553 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 SYNPOQ8N3V7 929 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 NAT16Q8N8M0 369 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 ELMO1Q92556 727 aa8.66□□□□□ -1.02
NCBP3-204ENST00000574911 C11orf24Q96F05 449 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms