RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KLC3Q6P597 504 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 LCTLQ6UWM7 567 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TIFABQ6ZNK6 161 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 CDHR3Q6ZTQ4 885 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 GPR135Q8IZ08 494 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 DNAJC22Q8N4W6 341 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 OR56A3Q8NH54 315 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 KCNE4Q8WWG9 221 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ZNF501Q96CX3 271 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 MED8Q96G25 268 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TSNARE1Q96NA8 513 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ACAT2Q9BWD1 397 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 SGPP1Q9BX95 441 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 ATG10Q9H0Y0 220 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 VPS11Q9H270 941 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 CPNE5Q9HCH3 593 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 FOXJ2Q9P0K8 574 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 PSMC3IPQ9P2W1 217 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 TAC3Q9UHF0 121 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 IKZF3Q9UKT9 509 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 RNF112Q9ULX5 631 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 TMEM184BQ9Y519 407 aaPredicted RBP10.6□□□□□ -0.71
CHD3-216ENST00000573936 KIF26BQ2KJY2 2108 aa10.6□□□□□ -0.71
CHD3-216ENST00000573936 COL6A6A6NMZ7 2263 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SYCE1LA8MT33 242 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TRIM49D1C9J1S8 452 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 E7EQ34 232 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 KLK10O43240 276 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SRPX2O60687 465 aaPredicted RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 ERLIN1O75477 346 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 STK17BO94768 372 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 KLHL2O95198 593 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ALDOAP04075 364 aaKnown RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 TFEBP19484 476 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 MAGEA12P43365 314 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TBPL1P62380 186 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 RELAQ04206 551 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ZIC1Q15915 447 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TCTE1Q5JU00 501 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 PRAMEF13Q5VWM6 474 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 FCRL6Q6DN72 434 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SULT1C3Q6IMI6 304 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TLDC1Q6P9B6 456 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 MBOAT1Q6ZNC8 495 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 C17orf64Q86WR6 236 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ZFAND4Q86XD8 727 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TMEM126BQ8IUX1 230 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 MCATQ8IVS2 390 aaKnown RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 FAM20CQ8IXL6 584 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 NLGN4XQ8N0W4 816 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SPATA6LQ8N4H0 392 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 NLGN4YQ8NFZ3 816 aaPredicted RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 RHEBL1Q8TAI7 183 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ALKBH8Q96BT7 664 aaKnown RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 PLCD4Q9BRC7 762 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 DPH7Q9BTV6 452 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ULBP3Q9BZM4 244 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SPRY4Q9C004 299 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 SLC7A5P2Q9GIP4 190 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 CNOT10Q9H9A5 744 aaKnown RBP10.59□□□□□ -0.71
CHD3-216ENST00000573936 FAM60AQ9NP50 221 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 IGSF5Q9NSI5 407 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 ABCF3Q9NUQ8 709 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 TMEM184CQ9NVA4 438 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 AP1M2Q9Y6Q5 423 aa10.59□□□□□ -0.71
CHD3-216ENST00000573936 AHCTF1Q8WYP5 2266 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 OR2A25A4D2G3 310 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 CYSRT1A8MQ03 144 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 RAD1O60671 282 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 KERAO60938 352 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 CPNE3O75131 537 aaKnown RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 SCRG1O75711 98 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 IPO13O94829 963 aaKnown RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 KIAA0754O94854 1291 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 DLGAP3O95886 979 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 RBP1P09455 135 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 CCNYL3P0C7X3 344 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 EZRP15311 586 aaKnown RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 GCAP28676 217 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 HSD17B3P37058 310 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 GABRA4P48169 554 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 VAC14Q08AM6 782 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 ABHD18Q0P651 414 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 DLG1Q12959 904 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 LY6DQ14210 128 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 RASA2Q15283 850 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 OR4D1Q15615 310 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 BEND6Q5SZJ8 279 aaPredicted RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 PWWP2BQ6NUJ5 590 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PCSK4Q6UW60 755 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 C6orf15Q6UXA7 325 aaPredicted RBP10.58□□□□□ -0.72
CHD3-216ENST00000573936 ISCA2Q86U28 154 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 LCA5Q86VQ0 697 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 PAQR7Q86WK9 346 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 DTX1Q86Y01 620 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 TDRPQ86YL5 185 aa10.58□□□□□ -0.72
CHD3-216ENST00000573936 KLHDC8AQ8IYD2 350 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms