RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 IGHEP01854 428 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 ZGLP1P0C6A0 271 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 ITGA3P26006 1051 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 GABRB3P28472 473 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 SLC1A2P43004 574 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 PNLIPRP1P54315 467 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 PRDX1Q06830 199 aaKnown RBP17.26■□□□□ 0.35
CHD3-214ENST00000572579 HKDC1Q2TB90 917 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 ATG9BQ674R7 924 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 CCDC137Q6PK04 289 aaKnown RBP17.26■□□□□ 0.35
CHD3-214ENST00000572579 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 C8orf44Q96CB5 159 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 PBKQ96KB5 322 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 ZFYVE21Q9BQ24 234 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 ZNF304Q9HCX3 659 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 MRPS30Q9NP92 439 aaKnown RBP17.26■□□□□ 0.35
CHD3-214ENST00000572579 KLHL42Q9P2K6 505 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 TAC3Q9UHF0 121 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 RUVBL1Q9Y265 456 aaKnown RBP17.26■□□□□ 0.35
CHD3-214ENST00000572579 DHRS7Q9Y394 339 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 MRFAP1Q9Y605 127 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 HIVEP3Q5T1R4 2406 aa17.26■□□□□ 0.35
CHD3-214ENST00000572579 P2RX6O15547 441 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 AGFG2O95081 481 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 PIM1P11309 404 aaPredicted RBP17.25■□□□□ 0.35
CHD3-214ENST00000572579 CMPK1P30085 196 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 SARNPP82979 210 aaKnown RBP17.25■□□□□ 0.35
CHD3-214ENST00000572579 ARHGAP19Q14CB8 494 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 NR6A1Q15406 480 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 ICE2Q659A1 982 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 NEK10Q6ZWH5 1172 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 PLD3Q8IV08 490 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 AMER3Q8N944 861 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 FBXO15Q8NCQ5 510 aaPredicted RBP17.25■□□□□ 0.35
CHD3-214ENST00000572579 CD200R1Q8TD46 325 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 GPR21Q99679 349 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 CUEDC1Q9NWM3 386 aaPredicted RBP17.25■□□□□ 0.35
CHD3-214ENST00000572579 MRPS2Q9Y399 296 aaKnown RBP17.25■□□□□ 0.35
CHD3-214ENST00000572579 CNTRLQ7Z7A1 2325 aa17.25■□□□□ 0.35
CHD3-214ENST00000572579 CTAGE9A4FU28 777 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 BANF1O75531 89 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 KLHL18O94889 574 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 ALPPP05187 535 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 PAMP19021 973 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 RPA3P35244 121 aaPredicted RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 SKIV2L2P42285 1042 aaKnown RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 RNASEH2BQ5TBB1 312 aaKnown RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 PRMT9Q6P2P2 845 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 PIWIL4Q7Z3Z4 852 aaKnown RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 IGDCC3Q8IVU1 814 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 CPNE9Q8IYJ1 553 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 IQCKQ8N0W5 287 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 RAB42Q8N4Z0 105 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 CSNK1A1LQ8N752 337 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 PRR7Q8TB68 274 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 PSMF1Q92530 271 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 KCNJ9Q92806 393 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 CRB3Q9BUF7 120 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 LRRC4CQ9HCJ2 640 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 XAB2Q9HCS7 855 aaKnown RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 SEMA3GQ9NS98 782 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 C20orf96Q9NUD7 363 aaPredicted RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 MAP10Q9P2G4 905 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 C3orf18Q9UK00 162 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 NXT1Q9UKK6 140 aaKnown RBP17.24■□□□□ 0.35
CHD3-214ENST00000572579 FBXO5Q9UKT4 447 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 FAM169AQ9Y6X4 670 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 NOTCH2Q04721 2471 aa17.24■□□□□ 0.35
CHD3-214ENST00000572579 WIPF3A6NGB9 483 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 E5RI56 91 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 STATHP02808 62 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 CATP04040 527 aaKnown RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 IMPA1P29218 277 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 SLC26A3P40879 764 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 PGGT1BP53609 377 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 EMP3P54852 163 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 TSTA3Q13630 321 aaPredicted RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 RBBP7Q16576 425 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 LONRF1Q17RB8 773 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 SYT16Q17RD7 645 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 ZXDCQ2QGD7 858 aaPredicted RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 HSP90AA5PQ58FG0 334 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 SLC35F6Q8N357 371 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 ZADH2Q8N4Q0 377 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 CATSPER1Q8NEC5 780 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 ACTRT1Q8TDG2 376 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 SSC4DQ8WTU2 575 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 OSBPL9Q96SU4 736 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 AARSD1Q9BTE6 412 aaKnown RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 SAMD15Q9P1V8 674 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 ZNF282Q9UDV7 671 aaPredicted RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 ERRFI1Q9UJM3 462 aaPredicted RBP17.23■□□□□ 0.35
CHD3-214ENST00000572579 ADAMTS6Q9UKP5 1117 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 SH2B3Q9UQQ2 575 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 POLEQ07864 2286 aa17.23■□□□□ 0.35
CHD3-214ENST00000572579 H7BY64 318 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 SMAPO00193 183 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms