RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ZZZ3Q8IYH5 903 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PITX2Q99697 317 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 REXO4Q9GZR2 422 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TRMT13Q9NUP7 481 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 FBXO10Q9UK96 956 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 ERVK-11Q9UQG0 969 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 COCHO43405 550 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TBX1O43435 398 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TBL1XO60907 577 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PRAMEF12O95522 483 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CYBAP13498 195 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TUFMP49411 452 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 KCNJ8Q15842 424 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PDE12Q6L8Q7 609 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 RETSATQ6NUM9 610 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CBLL1Q75N03 491 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 C10orf111Q8N326 155 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 OVCA2Q8WZ82 227 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 TNKS2Q9H2K2 1166 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 IL26Q9NPH9 171 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GKN1Q9NS71 199 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 FAM120CQ9NX05 1096 aaKnown RBP10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PPT2Q9UMR5 302 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 CORO2BQ9UQ03 480 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 PCDHGB3Q9Y5G1 929 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 A3GALT2U3KPV4 340 aa10.45□□□□□ -0.74
CCDC40-207ENST00000572253 GLTPD2A6NH11 291 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 SUV39H1O43463 412 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 PPIBP23284 216 aaKnown RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 S100A1P23297 94 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 TACR1P25103 407 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NSG1P42857 185 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 MAPK8P45983 427 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 VLDLRP98155 873 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 CREMQ03060 361 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 CDH18Q13634 790 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 FBXO43Q4G163 708 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 CXorf57Q6NSI4 855 aaKnown RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 FUT10Q6P4F1 479 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NXPE1Q8N323 547 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 VPS37AQ8NEZ2 397 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 ASIC4Q96FT7 647 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 MYOCQ99972 504 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NMRK2Q9NPI5 230 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 HECAQ9UBI9 543 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 GREB1Q4ZG55 1949 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 PNMA8CA0A1B0GUJ8 204 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 AGAP5A6NIR3 686 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 SEPT4O43236 478 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NBNO60934 754 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 RPLP0P05388 317 aaKnown RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 C8GP07360 202 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 ACPPP15309 386 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 PRPH2P23942 346 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 GSSP48637 474 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF45Q02386 682 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 TBCEQ15813 527 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NDUFA5Q16718 116 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 NOXRED1Q6NXP6 359 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 KIAA1958Q8N8K9 716 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 PIH1D2Q8WWB5 315 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 ALOXE3Q9BYJ1 711 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 RAPGEFL1Q9UHV5 662 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF840PA6NDX5 716 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 TRBC1P01850 177 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 KLKB1P03952 638 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 OR56A5P0C7T3 313 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 PTPN6P29350 595 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 SEPHS1P49903 392 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 SLC13A2Q13183 592 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 CATSPEREQ5SY80 951 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 TPRG1LQ5T0D9 272 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 FRG2Q64ET8 278 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 FAHD1Q6P587 224 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 RTN4RL1Q86UN2 441 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 LYSMD2Q8IV50 215 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 STX19Q8N4C7 294 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 OR6K2Q8NGY2 324 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 EID2BQ96D98 161 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 APIPQ96GX9 242 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 FRG2BQ96QU4 278 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 EPYCQ99645 322 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 C19orf43Q9BQ61 176 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 CORO1BQ9BR76 489 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 RHNO1Q9BSD3 238 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 SPATA9Q9BWV2 254 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 MOV10Q9HCE1 1003 aaKnown RBP10.44□□□□□ -0.74
CCDC40-207ENST00000572253 DNAJC11Q9NVH1 559 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 KLHL42Q9P2K6 505 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 UGT2A1Q9Y4X1 527 aa10.44□□□□□ -0.74
CCDC40-207ENST00000572253 TRPM7Q96QT4 1865 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TRBV5-4A0A0C4DH59 114 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 METTL15A6NJ78 407 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 KCNK5O95279 499 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CLDN7O95471 211 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PTTG1O95997 202 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 BMP1P13497 986 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ALOX12P18054 663 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 GPX2P18283 190 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms