RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 LONRF1Q17RB8 773 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 SYT16Q17RD7 645 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 HKDC1Q2TB90 917 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 PRTGQ2VWP7 1150 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 ZNF534Q76KX8 674 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 LDB1Q86U70 411 aaPredicted RBP18.84■□□□□ 0.61
CCDC40-206ENST00000572083 VSTM4Q8IW00 320 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 OR52K1Q8NGK4 314 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 OR2A1Q8NGT9 310 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 CHTF18Q8WVB6 975 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 RAD51AP1Q96B01 352 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 MMABQ96EY8 250 aaPredicted RBP18.84■□□□□ 0.61
CCDC40-206ENST00000572083 C14orf79Q96F83 325 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 ACAT2Q9BWD1 397 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 SYNPO2LQ9H987 977 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 STMN3Q9NZ72 180 aa18.84■□□□□ 0.61
CCDC40-206ENST00000572083 TTC7AQ9ULT0 858 aaPredicted RBP18.84■□□□□ 0.61
CCDC40-206ENST00000572083 RUVBL1Q9Y265 456 aaKnown RBP18.84■□□□□ 0.61
CCDC40-206ENST00000572083 LOC102723996A0A087X1L8 192 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 A0A1W2PPV9 198 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 OR2A25A4D2G3 310 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 H0YGG7 62 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 PRPF4O43172 522 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCDC40-206ENST00000572083 SLCO2B1O94956 709 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 C1orf105O95561 183 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 MYBL2P10244 700 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 CAPN3P20807 821 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 ST13P50502 369 aaKnown RBP18.83■□□□□ 0.6
CCDC40-206ENST00000572083 GDF10P55107 478 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 ARF3P61204 181 aaPredicted RBP18.83■□□□□ 0.6
CCDC40-206ENST00000572083 RAB42Q8N4Z0 105 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 DNAAF3Q8N9W5 541 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 OR6P1Q8NGX9 317 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 OR4L1Q8NH43 312 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 ZNF778Q96MU6 729 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 GPR137Q96N19 417 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 DPH7Q9BTV6 452 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 HES7Q9BYE0 225 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 TEKT2Q9UIF3 430 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 TSR3Q9UJK0 312 aaKnown RBP18.83■□□□□ 0.6
CCDC40-206ENST00000572083 MKL2Q9ULH7 1088 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 CDC14AQ9UNH5 594 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 R3HDM2Q9Y2K5 976 aaKnown RBP18.83■□□□□ 0.6
CCDC40-206ENST00000572083 MEMO1Q9Y316 297 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 PCDHA3Q9Y5H8 950 aa18.83■□□□□ 0.6
CCDC40-206ENST00000572083 A0A0U1RQJ8 604 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 RCCD1A6NED2 376 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 A8MUI8 341 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 ZNHIT1O43257 154 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 CBFA2T2O43439 604 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 TJP3O95049 919 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 ANXA5P08758 320 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 SLC26A3P40879 764 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 AP2B1P63010 937 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 FASTKQ14296 549 aaKnown RBP18.82■□□□□ 0.6
CCDC40-206ENST00000572083 P3H1Q32P28 736 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 FASTKD1Q53R41 847 aaKnown RBP18.82■□□□□ 0.6
CCDC40-206ENST00000572083 TSTD2Q5T7W7 516 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 FCRLBQ6BAA4 426 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 FBXO42Q6P3S6 717 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 TMEM205Q6UW68 189 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 SPPL2CQ8IUH8 684 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 ZC3H7AQ8IWR0 971 aaKnown RBP18.82■□□□□ 0.6
CCDC40-206ENST00000572083 CSNK1A1LQ8N752 337 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 GSDMBQ8TAX9 411 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 HMGCLL1Q8TB92 370 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 MVB12AQ96EY5 273 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 IMMP1LQ96LU5 166 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 TUBB6Q9BUF5 446 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 TGIF2Q9GZN2 237 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 GPAMQ9HCL2 828 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 MKKSQ9NPJ1 570 aaPredicted RBP18.82■□□□□ 0.6
CCDC40-206ENST00000572083 KLHL1Q9NR64 748 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 ZNF835Q9Y2P0 537 aa18.82■□□□□ 0.6
CCDC40-206ENST00000572083 ZNF469Q96JG9 3925 aaPredicted RBP18.81■□□□□ 0.6
CCDC40-206ENST00000572083 IGHV3-20A0A0C4DH32 117 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 VPS26AO75436 327 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 SEC24DO94855 1032 aaPredicted RBP18.81■□□□□ 0.6
CCDC40-206ENST00000572083 ICAM2P13598 275 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 CMPK1P30085 196 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 MAT1AQ00266 395 aaKnown RBP18.81■□□□□ 0.6
CCDC40-206ENST00000572083 CDH17Q12864 832 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 Q6ZPB1 254 aaPredicted RBP18.81■□□□□ 0.6
CCDC40-206ENST00000572083 BEST3Q8N1M1 668 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 THAP3Q8WTV1 239 aaPredicted RBP18.81■□□□□ 0.6
CCDC40-206ENST00000572083 POM121Q96HA1 1249 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 SIGLEC12Q96PQ1 595 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 SPOCK3Q9BQ16 436 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 MCCC2Q9HCC0 563 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 ANKRD10Q9NXR5 420 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 NEU2Q9Y3R4 380 aa18.81■□□□□ 0.6
CCDC40-206ENST00000572083 A0A0A6YYC8 382 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-206ENST00000572083 I3L1I5 382 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-206ENST00000572083 TTI1O43156 1089 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 PSMD3O43242 534 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 ZNF189O75820 626 aaPredicted RBP18.8■□□□□ 0.6
CCDC40-206ENST00000572083 C8orf89P0DMQ9 161 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 RWDD2BP57060 319 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 PRAMEP78395 509 aa18.8■□□□□ 0.6
CCDC40-206ENST00000572083 BTBD16Q32M84 506 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms