RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ATE1O95260 518 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 RFTN2Q52LD8 501 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MPPE1Q53F39 396 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 ATG9BQ674R7 924 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 BICRALQ6AI39 1079 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 DTWD1Q8N5C7 304 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 KRTCAP2Q8N6L1 136 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 TMEM40Q8WWA1 233 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 COL21A1Q96P44 957 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PSKH2Q96QS6 385 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 SLC30A3Q99726 388 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 TVP23BQ9NYZ1 205 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 C1QTNF3-AMACRE9PGA6 284 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 M0QX08 132 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 ACOT8O14734 319 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 GPR32O75388 356 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PRG2P13727 222 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 GABRB3P28472 473 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 HTR6P50406 440 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PLA2G16P53816 162 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PHC1P78364 1004 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 PIK3R6Q5UE93 754 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 ENPP6Q6UWR7 440 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 GFM1Q96RP9 751 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 POLR2J3Q9H1A7 115 aaKnown RBP10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 POFUT2Q9Y2G5 429 aa10.84□□□□□ -0.67
PCDHGA4-201ENST00000571252 BTN3A3O00478 584 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 NME6O75414 186 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CXCL14O95715 111 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 EOMESO95936 686 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CCNYL3P0C7X3 344 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ACLYP53396 1101 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 TAS2R41P59536 307 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 MACC1Q6ZN28 852 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ARL14EPQ8N8R7 260 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 BRI3BPQ8WY22 251 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 NUMBLQ9Y6R0 609 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 IRGMA1A4Y4 181 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 H0YC42 278 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PGRMC2O15173 223 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 AP1G1O43747 822 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SSNA1O43805 119 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PCDH7O60245 1069 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CLDN7O95471 211 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 FGBP02675 491 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PRSS56P0CW18 603 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PCSK6P29122 969 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 OPRL1P41146 370 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SSR2P43308 183 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 RORCP51449 518 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 RPS3AP61247 264 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ABRAXAS2Q15018 415 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 LRRC73Q5JTD7 316 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 LCN1P1Q5VSP4 162 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 TUBA3EQ6PEY2 450 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 AGMOQ6ZNB7 445 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 C1orf52Q8N6N3 182 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 METTL25Q8N6Q8 603 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 OR10T2Q8NGX3 314 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 FUBP1Q96AE4 644 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CRELD1Q96HD1 420 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PRDM8Q9NQV8 689 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 OLAHQ9NV23 265 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 MKLN1Q9UL63 735 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 TMED5Q9Y3A6 229 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CPQQ9Y646 472 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 BCAS1O75363 584 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SPATA31D3P0C874 917 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 MYL9P24844 172 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 GRIA2P42262 883 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 DGKEP52429 567 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 TSTQ16762 297 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 UPP1Q16831 310 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SPATA31D4Q6ZUB0 917 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 EXOSC8Q96B26 276 aaKnown RBP10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 MIR1-1HGQ9H1L0 117 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 KCNH6Q9H252 994 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ANKRA2Q9H9E1 313 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ANKHQ9HCJ1 492 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 ZDHHC3Q9NYG2 299 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 PCTPQ9UKL6 214 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 CNTRLQ7Z7A1 2325 aa10.83□□□□□ -0.68
PCDHGA4-201ENST00000571252 SMIM18P0DKX4 95 aa10.82□□□□□ -0.68
PCDHGA4-201ENST00000571252 BCKDHAP12694 445 aa10.82□□□□□ -0.68
PCDHGA4-201ENST00000571252 ARSAP15289 507 aa10.82□□□□□ -0.68
PCDHGA4-201ENST00000571252 CSKP41240 450 aa10.82□□□□□ -0.68
PCDHGA4-201ENST00000571252 MAPK9P45984 424 aa10.82□□□□□ -0.68
PCDHGA4-201ENST00000571252 SCARB2Q14108 478 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms