RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CTNNAL1Q9UBT7 734 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 LRBAP50851 2863 aa12.83□□□□□ -0.36
CCDC40-205ENST00000571028 ABCA12Q86UK0 2595 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 A0A096LPK6 155 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 EIF3FO00303 357 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 CREG1O75629 220 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 GUCA1CO95843 209 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 TUBBP07437 444 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 HIST1H2AGP0C0S8 130 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 HIST1H2ADP20671 130 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 CYP2A7P20853 494 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 CRABP2P29373 138 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 PKLRP30613 574 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 CAPZBP47756 277 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 SEPHS1P49903 392 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 SERPINB8P50452 374 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 IRF9Q00978 393 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 GRB7Q14451 532 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 INPP5JQ15735 1006 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 LGSNQ5TDP6 509 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 CACHD1Q5VU97 1274 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 MBOAT1Q6ZNC8 495 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 TBC1D1Q86TI0 1168 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 APLFQ8IW19 511 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 FAM20CQ8IXL6 584 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 RAB42Q8N4Z0 105 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 PPFIBP2Q8ND30 876 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 OR9A1PQ8NGU1 263 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 MCOLN3Q8TDD5 553 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 EPS8L3Q8TE67 593 aaKnown RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 KCTD4Q8WVF5 259 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 DLG3Q92796 817 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 EXT2Q93063 718 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 ZDHHC12Q96GR4 267 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 HIST1H2AHQ96KK5 128 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 PPM1MQ96MI6 270 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 HIST1H2AJQ99878 128 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 H2AFJQ9BTM1 129 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 TRIM54Q9BYV2 358 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 EPB41L1Q9H4G0 881 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 SPHK1Q9NYA1 384 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 ACTR10Q9NZ32 417 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 LNPEPQ9UIQ6 1025 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 G3BP2Q9UN86 482 aaKnown RBP12.82□□□□□ -0.36
CCDC40-205ENST00000571028 PDE10AQ9Y233 779 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 ACOT9Q9Y305 439 aa12.82□□□□□ -0.36
CCDC40-205ENST00000571028 FOXO6A8MYZ6 492 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 C2orf74A8MZ97 194 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 RASGRF2O14827 1237 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ERLIN1O75477 346 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 KIAA0754O94854 1291 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 C2P06681 752 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 C8GP07360 202 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 CHRM5P08912 532 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 SNRPAP09012 282 aaKnown RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 POU3F2P20265 443 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 CDH3P22223 829 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 RAB28P51157 221 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 KPNA2P52292 529 aaKnown RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 FASTKQ14296 549 aaKnown RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ZKSCAN8Q15776 578 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 PHKG1Q16816 387 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ADGRD1Q6QNK2 874 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 FRA10AC1Q70Z53 315 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 TRIM73Q86UV7 250 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 SYTL1Q8IYJ3 562 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ADGRF3Q8IZF5 1079 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 NXNL1Q96CM4 212 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 C5orf34Q96MH7 638 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 PARVBQ9HBI1 364 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ACSS2Q9NR19 701 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ARL15Q9NXU5 204 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 PSMC3IPQ9P2W1 217 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF180Q9UJW8 692 aa12.81□□□□□ -0.36
CCDC40-205ENST00000571028 A0A087X1B8 175 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 IQANK1A0A1B0GTG1 560 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 NCF1BA6NI72 391 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 NCF1CA8MVU1 366 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 GFYI3L273 518 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 GOLGA8RI6L899 631 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SORBS2O94875 1100 aaKnown RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 MT-ND3P03897 115 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ALDOAP04075 364 aaKnown RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 LTA4HP09960 611 aaKnown RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SLC35E2BP0CK96 405 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 NCF1P14598 390 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-205ENST00000571028 PVRP15151 417 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 UGT2B7P16662 529 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ZNF28P17035 718 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 GLRBP48167 497 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 ARL4DP49703 201 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 DLG1Q12959 904 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 DNASE1L3Q13609 305 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
CCDC40-205ENST00000571028 SUSD1Q6UWL2 747 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms