RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 METTL27Q8N6F8 245 aaPredicted RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 GABPB2Q8TAK5 448 aaPredicted RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 HPS1Q92902 700 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 NACC2Q96BF6 587 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 PKP4Q99569 1192 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 GPR21Q99679 349 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SMAD5Q99717 465 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC30A3Q99726 388 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 KRTAP4-6Q9BYQ5 205 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC26A1Q9H2B4 701 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC6A20Q9NP91 592 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLAMF7Q9NQ25 335 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 IGSF5Q9NSI5 407 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 UTP6Q9NYH9 597 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 ANKMY1Q9P2S6 941 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 CTSFQ9UBX1 484 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 TAC3Q9UHF0 121 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 VPS4AQ9UN37 437 aa11.82□□□□□ -0.52
CTDNEP1-205ENST00000570828 LOC105369274A0A096LPK9 316 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 LOC102723532A0A0G2JNH3 316 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 HYKKA2RU49 373 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 AGPSO00116 658 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 IPO13O94829 963 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SORBS2O94875 1100 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 TTC4O95801 387 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC16A8O95907 504 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 ONECUT2O95948 504 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MPC1LP0DKB6 136 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MMP11P24347 488 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 OR1D4P47884 311 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MPP1Q00013 466 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 CRYMQ14894 314 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MYBPC3Q14896 1274 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MUM1Q2TAK8 710 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLC6A19Q695T7 634 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 JMJD6Q6NYC1 403 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRMT9Q6P2P2 845 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF549Q6P9A3 640 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 COX15Q7KZN9 410 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 OR4N4Q8N0Y3 316 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 FBXO15Q8NCQ5 510 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 CD200R1Q8TD46 325 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF480Q8WV37 535 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 TM9SF4Q92544 642 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 INPP5DQ92835 1189 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 COL26A1Q96A83 441 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 VPS50Q96JG6 964 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SIGLEC10Q96LC7 697 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 PLCD4Q9BRC7 762 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 KCNF1Q9H3M0 494 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SOX17Q9H6I2 414 aaPredicted RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 IARS2Q9NSE4 1012 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 ABCF3Q9NUQ8 709 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 LUZP4Q9P127 313 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 TRMT6Q9UJA5 497 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 FBXL4Q9UKA2 621 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MED16Q9Y2X0 877 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 DHRS7Q9Y394 339 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 MAU2Q9Y6X3 613 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 SEC16AO15027 2179 aa11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 PRRC2CQ9Y520 2896 aaKnown RBP11.81□□□□□ -0.52
CTDNEP1-205ENST00000570828 EIF3FO00303 357 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZBTB14O43829 449 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ITGA3P26006 1051 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 YBX1P67809 324 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 OCA2Q04671 838 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 AIMP2Q13155 320 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 UBAP2LQ14157 1087 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 RBBP7Q16576 425 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 THEMIS2Q5TEJ8 643 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ICE2Q659A1 982 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 LRRC8EQ6NSJ5 796 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 UGT3A1Q6NUS8 523 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 SHISA6Q6ZSJ9 500 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 UBE2R2Q712K3 238 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 PIWIL4Q7Z3Z4 852 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ADCK2Q7Z695 626 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 PCGF5Q86SE9 256 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 CPNE9Q8IYJ1 553 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 CSNK1A1LQ8N752 337 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 GALNT11Q8NCW6 608 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 PPFIBP2Q8ND30 876 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ASB11Q8WXH4 323 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 RERGQ96A58 199 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 PNPLA2Q96AD5 504 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 CABS1Q96KC9 395 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 NAT9Q9BTE0 207 aa11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 AARSD1Q9BTE6 412 aaKnown RBP11.8□□□□□ -0.52
CTDNEP1-205ENST00000570828 ZNF304Q9HCX3 659 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms