RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 KCTD5Q9NXV2 234 aa14.88□□□□□ -0.03
USP43-202ENST00000570475 TNFRSF11BO00300 401 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CPNE6O95741 557 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 EBLN1P0CF75 366 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 LAMP1P11279 417 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CTGFP29279 349 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 KDELR2P33947 212 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CTSKP43235 329 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 PREPP48147 710 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 MEF2AQ02078 507 aaPredicted RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 MXD1Q05195 221 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CCDC85BQ15834 202 aaPredicted RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 TIGD6Q17RP2 521 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 NOXRED1Q6NXP6 359 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CACTIN-AS1Q8N1I8 211 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 C1orf52Q8N6N3 182 aaKnown RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 S100ZQ8WXG8 99 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 ALOXE3Q9BYJ1 711 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 NUAK2Q9H093 628 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 GORASP2Q9H8Y8 452 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 TPT1P8Q9HAU6 139 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 SGK2Q9HBY8 427 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CFAP97Q9P2B7 532 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 ACSL6Q9UKU0 697 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 OARD1Q9Y530 152 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 APOA1P02647 267 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CYP2A7P20853 494 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 HNF4AP41235 474 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 DMPKQ09013 629 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 ABHD18Q0P651 414 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 ZNF691Q5VV52 312 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 FRG2Q64ET8 278 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CPZQ66K79 652 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 IFNL1Q8IU54 200 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CMTM8Q8IZV2 173 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 TMEM169Q96HH4 297 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 SPATA17Q96L03 361 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 FRG2BQ96QU4 278 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 DNAJC11Q9NVH1 559 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 C14orf119Q9NWQ9 140 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 TAS2R16Q9NYV7 291 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 EHD3Q9NZN3 535 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 NPIPB15A6NHN6 443 aaPredicted RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 H3BN98 237 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 SLC22A1O15245 554 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 KRT8P05787 483 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 STSP08842 583 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 DNAJA1P31689 397 aaKnown RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 MBTPS1Q14703 1052 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CPTPQ5TA50 214 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 NLGN4XQ8N0W4 816 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 CADM3Q8N126 398 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 NXPE1Q8N323 547 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 OR4A15Q8NGL6 344 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 PPP1R14BQ96C90 147 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 Q96MT0 163 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 GPR83Q9NYM4 423 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 PCDHGA10Q9Y5H3 936 aa14.87□□□□□ -0.03
USP43-202ENST00000570475 GPC6Q9Y625 555 aaPredicted RBP14.87□□□□□ -0.03
USP43-202ENST00000570475 TPST2O60704 377 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CCNDBP1O95273 360 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 GABRR2P28476 465 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ILF2Q12905 390 aaKnown RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 ADNP2Q6IQ32 1131 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 HMGN2P46Q86SG4 172 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 TMPRSS11BQ86T26 416 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 FAM217AQ8IXS0 508 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ADAMTS16Q8TE57 1224 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 MUL1Q969V5 352 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CEP44Q9C0F1 390 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 GPN2Q9H9Y4 310 aaPredicted RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 INIPQ9NRY2 104 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 GALTP07902 379 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CYBAP13498 195 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 GADD45AP24522 165 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 KRT20P35900 424 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CTSOP43234 321 aaPredicted RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 DSC1Q08554 894 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 GRSF1Q12849 480 aaKnown RBP eCLIP14.86□□□□□ -0.03
USP43-202ENST00000570475 CAMK2GQ13555 558 aaPredicted RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 TAB1Q15750 504 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 VMACQ2NL98 169 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 C17orf99Q6UX52 265 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 DNAJB7Q7Z6W7 309 aaPredicted RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 VRK3Q8IV63 474 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 RAVER1Q8IY67 606 aaKnown RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 OTULINQ96BN8 352 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 FEVQ99581 238 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 KCNH6Q9H252 994 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CLMPQ9H6B4 373 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 CTPS2Q9NRF8 586 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 RAD18Q9NS91 495 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ABCB8Q9NUT2 735 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 THG1LQ9NWX6 298 aaKnown RBP14.86□□□□□ -0.03
USP43-202ENST00000570475 PPT2Q9UMR5 302 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ZNF197O14709 1029 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ASNA1O43681 348 aa14.86□□□□□ -0.03
USP43-202ENST00000570475 ACRV1P26436 265 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms