RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 THAP4Q8WY91 577 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 C17orf62Q9BQA9 187 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 RHOJQ9H4E5 214 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 PARVBQ9HBI1 364 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CCDC177Q9NQR7 707 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 SLC22A11Q9NSA0 550 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 ABCF3Q9NUQ8 709 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 CUEDC1Q9NWM3 386 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 IFT80Q9P2H3 777 aaPredicted RBP12.47□□□□□ -0.41
CNOT1-220ENST00000569916 IKZF3Q9UKT9 509 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 SEC16AO15027 2179 aa12.47□□□□□ -0.41
CNOT1-220ENST00000569916 TCRBV9S1A1TA0A576 114 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 CXorf49A8MYA2 514 aaPredicted RBP12.46□□□□□ -0.41
CNOT1-220ENST00000569916 ONECUT2O95948 504 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 C1QAP02745 245 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 TAS2R39P59534 338 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 GPX6P59796 221 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 ABATP80404 500 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 SLC7A5Q01650 507 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF460Q14592 562 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 WASHC2DQ5SRD0 308 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 PRAMEF13Q5VWM6 474 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 MLIPQ5VWP3 458 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 CPZQ66K79 652 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 MRPL14Q6P1L8 145 aaKnown RBP12.46□□□□□ -0.41
CNOT1-220ENST00000569916 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 PALM2Q8IXS6 379 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 DTWD1Q8N5C7 304 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 C9orf43Q8TAL5 461 aaPredicted RBP12.46□□□□□ -0.41
CNOT1-220ENST00000569916 ABHD17AQ96GS6 310 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 VPS39Q96JC1 886 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 TRIM55Q9BYV6 548 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 NDOR1Q9UHB4 597 aa12.46□□□□□ -0.41
CNOT1-220ENST00000569916 GPN3Q9UHW5 284 aaPredicted RBP12.46□□□□□ -0.41
CNOT1-220ENST00000569916 TNRC6AQ8NDV7 1962 aaKnown RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 TLN1Q9Y490 2541 aaKnown RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ESYT3A0FGR9 886 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 HYKKA2RU49 373 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 FAM159BA6NKW6 160 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 H0YGG7 62 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 HAT1O14929 419 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 RFPL1O75677 317 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 DNAJB5O75953 348 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 PLA2G2AP14555 144 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 SAT1P21673 171 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ALAS2P22557 587 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 FOXL2P58012 376 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ARF3P61204 181 aaPredicted RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 CHAF1BQ13112 559 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ZXDCQ2QGD7 858 aaPredicted RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 PRTGQ2VWP7 1150 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 FAM214AQ32MH5 1076 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 THEMIS2Q5TEJ8 643 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 SBSNQ6UWP8 590 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 CYS1Q717R9 158 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 COX15Q7KZN9 410 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ZNF605Q86T29 641 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 TMEM151BQ8IW70 566 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 CDKL2Q92772 493 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 FKBP10Q96AY3 582 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 PDLIM5Q96HC4 596 aaKnown RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 C10orf90Q96M02 699 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 OR2A5Q96R48 311 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 SGPP1Q9BX95 441 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ATG10Q9H0Y0 220 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 SH2B3Q9UQQ2 575 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 PTRH2Q9Y3E5 179 aaKnown RBP12.45□□□□□ -0.42
CNOT1-220ENST00000569916 MED13Q9UHV7 2174 aa12.45□□□□□ -0.42
CNOT1-220ENST00000569916 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 WISP3O95389 354 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 EIF2S1P05198 315 aaKnown RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 CD63P08962 238 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ENO2P09104 434 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 GSTA2P09210 222 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
CNOT1-220ENST00000569916 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 FOLR3P41439 243 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 AP1S2P56377 157 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 RELAQ04206 551 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 NAE1Q13564 534 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ATP1A4Q13733 1029 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 PPP1R3AQ16821 1122 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 LCTLQ6UWM7 567 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 ADCK2Q7Z695 626 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 RAB43Q86YS6 212 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 PLD3Q8IV08 490 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
CNOT1-220ENST00000569916 METTL27Q8N6F8 245 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms