RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TSFMP43897 325 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 SARNPP82979 210 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 KLC1Q07866 573 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 CDC16Q13042 620 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 SIX1Q15475 284 aaPredicted RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 ANKRD20A4Q4UJ75 823 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 CTSL3PQ5NE16 218 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 B3GNTL1Q67FW5 361 aaPredicted RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 FRMPD2BQ6IN97 320 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 LRRC8BQ6P9F7 803 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 RNF44Q7L0R7 432 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 PRELID2Q8N945 189 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 OR11G2Q8NGC1 345 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 OR2A1Q8NGT9 310 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 SMPDL3AQ92484 453 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 BARD1Q99728 777 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 ZFYVE21Q9BQ24 234 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 KIFC1Q9BW19 673 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 UTP6Q9NYH9 597 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 CDC14AQ9UNH5 594 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 RUVBL2Q9Y230 463 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 NTNG1Q9Y2I2 539 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 SVILO95425 2214 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.4
SPG7-221ENST00000569720 DIDO1Q9BTC0 2240 aaKnown RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 POLEQ07864 2286 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 LOC105369274A0A096LPK9 316 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 LOC102723532A0A0G2JNH3 316 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 A0A1W2PPV9 198 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 OR2A25A4D2G3 310 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 ZNF839A8K0R7 811 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 E5RI56 91 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 SMAPO00193 183 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 NIPSNAP2O75323 286 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 MATN4O95460 622 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 HPP00738 406 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 TPSB2P20231 275 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 OGNP20774 298 aaKnown RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 CXCR2P25025 360 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 RPA3P35244 121 aaPredicted RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 HSD17B2P37059 387 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 COILP38432 576 aaPredicted RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 ADARP55265 1226 aaKnown RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 PER3P56645 1201 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 TSTA3Q13630 321 aaPredicted RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 TLR1Q15399 786 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 TPSAB1Q15661 275 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 TYSND1Q2T9J0 566 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 CCDC137Q6PK04 289 aaKnown RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 CES3Q6UWW8 571 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 PRSS58Q8IYP2 241 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 OR4N4Q8N0Y3 316 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 MFSD3Q96ES6 412 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 CAPZA3Q96KX2 299 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 BIRC8Q96P09 236 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 LMF1Q96S06 567 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 DPH7Q9BTV6 452 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 ACAT2Q9BWD1 397 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 MRPS30Q9NP92 439 aaKnown RBP12.52□□□□□ -0.41
SPG7-221ENST00000569720 SYBUQ9NX95 663 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 C3orf18Q9UK00 162 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 SOX13Q9UN79 622 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 CRYL1Q9Y2S2 319 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 CSAG2Q9Y5P2 127 aa12.52□□□□□ -0.41
SPG7-221ENST00000569720 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 KRT87PA6NCN2 255 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 FAM187AA6NFU0 413 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 GOLGA8KD6RF30 607 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 GOLGA8TH3BQL2 631 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 USP1O94782 785 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 CCNDBP1O95273 360 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 CATP04040 527 aaKnown RBP12.51□□□□□ -0.41
SPG7-221ENST00000569720 UQCRHP07919 91 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 PKMP14618 531 aaKnown RBP12.51□□□□□ -0.41
SPG7-221ENST00000569720 FDXRP22570 491 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 KCNJ1P48048 391 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 EMP3P54852 163 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 MFAP5Q13361 173 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 FASTKQ14296 549 aaKnown RBP12.51□□□□□ -0.41
SPG7-221ENST00000569720 GBX1Q14549 363 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 ARHGAP19Q14CB8 494 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 TTLL9Q3SXZ7 439 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 ARMC3Q5W041 872 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 KIAA0930Q6ICG6 404 aaPredicted RBP12.51□□□□□ -0.41
SPG7-221ENST00000569720 LINC00696Q6ZRV3 163 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 KCNMB4Q86W47 210 aa12.51□□□□□ -0.41
SPG7-221ENST00000569720 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms