RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 ZNF480Q8WV37 535 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 C8orf44Q96CB5 159 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 SERPINB12Q96P63 405 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 TCF12Q99081 682 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 LRRC4CQ9HCJ2 640 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 ERRFI1Q9UJM3 462 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 MRPS2Q9Y399 296 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-211ENST00000569653 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 FAM237BA0A1B0GVD1 139 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 A1L4Q6 167 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 AP3B1O00203 1094 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 E2F3O00716 465 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SRPX2O60687 465 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 KLHL18O94889 574 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SLC16A8O95907 504 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 STATHP02808 62 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 EIF2S1P05198 315 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CELA2AP08217 269 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CD63P08962 238 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CHRM3P20309 590 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 ITGA3P26006 1051 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 DHX34Q14147 1143 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CYP1B1Q16678 543 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 VWA2Q5GFL6 755 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 RNF187Q5TA31 235 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 TTC23LQ6PF05 361 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SDCCAG8Q86SQ7 713 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 C17orf53Q8N3J3 647 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 AMER3Q8N944 861 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 TTC29Q8NA56 475 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 GSDMBQ8TAX9 411 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CD200R1Q8TD46 325 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 ACTRT1Q8TDG2 376 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SMPDL3AQ92484 453 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SIGLEC10Q96LC7 697 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 OR2A5Q96R48 311 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 ZFYVE21Q9BQ24 234 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 TAC3Q9UHF0 121 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 G3BP2Q9UN86 482 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 NOVA2Q9UNW9 492 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 SH2B3Q9UQQ2 575 aa13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 RUVBL1Q9Y265 456 aaKnown RBP13.19□□□□□ -0.3
GTF3C1-211ENST00000569653 WIPF3A6NGB9 483 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 E7ENX8 843 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 H3BMM5 538 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 FOXS1O43638 330 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 BANF1O75531 89 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 USP1O94782 785 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ALPPP05187 535 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ZGLP1P0C6A0 271 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 TAP2Q03519 686 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 RBBP7Q16576 425 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 SYT16Q17RD7 645 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ICE2Q659A1 982 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ATG9BQ674R7 924 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 NAT8LQ8N9F0 302 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 MCUQ8NE86 351 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 PRR7Q8TB68 274 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 GRK7Q8WTQ7 553 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ASB11Q8WXH4 323 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 PSMF1Q92530 271 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 NACC2Q96BF6 587 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 FOPNLQ96NB1 174 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 GPR21Q99679 349 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 WDR77Q9BQA1 342 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 ZNF304Q9HCX3 659 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
GTF3C1-211ENST00000569653 SDR42E2A6NKP2 422 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 GFYI3L273 518 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 HAT1O14929 419 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 FANCGO15287 622 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CLDN1O95832 211 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 LDLRP01130 860 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 IGHEP01854 428 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 COX6A1P12074 109 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 MLNP12872 115 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 COL8A1P27658 744 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 GABRB3P28472 473 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 IMPA1P29218 277 aa13.17□□□□□ -0.3
GTF3C1-211ENST00000569653 CMPK1P30085 196 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms