RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TACR1P25103 407 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PSMB5P28074 263 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ACTR1BP42025 376 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PTDSS1P48651 473 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 ACTR1AP61163 376 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 RPS13P62277 151 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 MRPS22P82650 360 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 KIAA0040Q15053 153 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PGS1Q32NB8 556 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 USP39Q53GS9 565 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 PAGE2BQ5JRK9 111 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 SPANXN4Q5MJ08 99 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TPRG1LQ5T0D9 272 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 CYP2R1Q6VVX0 501 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TBC1D21Q8IYX1 336 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 FAM160A2Q8N612 972 aaPredicted RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 DEFB119Q8N690 84 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ZNF740Q8NDX6 193 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 CCL4L1Q8NHW4 92 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 WDR20Q8TBZ3 569 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 JPH3Q8WXH2 748 aaPredicted RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 MSANTD3Q96H12 275 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PPM1MQ96MI6 270 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 WDR92Q96MX6 357 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 OR2M4Q96R27 311 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 HOPXQ9BPY8 73 aaPredicted RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 TIMM29Q9BSF4 260 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 CAAP1Q9H8G2 361 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 EBF2Q9HAK2 575 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 GEMIN8Q9NWZ8 242 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 GPRC5BQ9NZH0 403 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 GMPR2Q9P2T1 348 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PIPSLA2A3N6 862 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 KLHL33A6NCF5 533 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ASPDHA6ND91 283 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 FAM170BA6NMN3 283 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 H0YIV9 168 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 H7BY64 318 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 DNAJA2O60884 412 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ETHE1O95571 254 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 STAMBPO95630 424 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 GBAP04062 536 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 AMD1P17707 334 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 JAK1P23458 1154 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 MAPK1P28482 360 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ZFP36L2P47974 494 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 IRX1P78414 480 aaPredicted RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 MLLT1Q03111 559 aaPredicted RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 SLC34A1Q06495 639 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 NFATC4Q14934 902 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 MAPKAPK3Q16644 382 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ZNF542PQ5EBM4 170 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 RABL3Q5HYI8 236 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 SAMD4BQ5PRF9 694 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 NOXRED1Q6NXP6 359 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 Q6ZSR6 202 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 DHDDSQ86SQ9 333 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ANKRD46Q86W74 232 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 C17orf64Q86WR6 236 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TRIM69Q86WT6 500 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 SYT12Q8IV01 421 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 C1orf52Q8N6N3 182 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 ENDOVQ8N8Q3 282 aaKnown RBP6.82□□□□□ -1.32
SMG1-215ENST00000568239 REPS1Q96D71 796 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 PRAP1Q96NZ9 151 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 OR52E6Q96RD3 313 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 EFCAB11Q9BUY7 163 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 SGPP1Q9BX95 441 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 SPNS1Q9H2V7 528 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 EGFL7Q9UHF1 273 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 DUSP12Q9UNI6 340 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 INVSQ9Y283 1065 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 ABCA7Q8IZY2 2146 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 MUC3AQ02505 3323 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 GNG14A0A1W2PPG7 69 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ANKRD28O15084 1053 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 FKBP6O75344 327 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 EEDO75530 441 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 MYO1DO94832 1006 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 PGRP06401 933 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ANPEPP15144 967 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SDC1P18827 310 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SLC6A2P23975 617 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CYP4F2P78329 520 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CTBSQ01459 385 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CSTF3Q12996 717 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 TRIM25Q14258 630 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 LRRC36Q1X8D7 754 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 UAP1L1Q3KQV9 507 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CAPRIN2Q6IMN6 1127 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 HACD2Q6Y1H2 254 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SYT13Q7L8C5 426 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 FAM20CQ8IXL6 584 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 LRRC56Q8IYG6 542 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 SIX5Q8N196 739 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 DEFB123Q8N688 67 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms