RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 PGGT1BP53609 377 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 DHX9Q08211 1270 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 HIF1AQ16665 826 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 ICE2Q659A1 982 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 FAAH2Q6GMR7 532 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CLEC18BQ6UXF7 455 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CYHR1Q6ZMK1 362 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 UBE2R2Q712K3 238 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 KCNMB4Q86W47 210 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PAQR7Q86WK9 346 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PPIL6Q8IXY8 311 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CSNK1A1LQ8N752 337 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 GALNT11Q8NCW6 608 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 STT3BQ8TCJ2 826 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CD200R1Q8TD46 325 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PNPLA2Q96AD5 504 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 FKBP10Q96AY3 582 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 ALKBH8Q96BT7 664 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 SNRNP40Q96DI7 357 aaKnown RBP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CAPZA3Q96KX2 299 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PWWP2AQ96N64 755 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PLCD4Q9BRC7 762 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 CRB3Q9BUF7 120 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 FAM114A2Q9NRY5 505 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 ASF1BQ9NVP2 202 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 PCYOX1Q9UHG3 505 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 FBXO5Q9UKT4 447 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 SHANK1Q9Y566 2161 aa11.66□□□□□ -0.54
GTF3C1-208ENST00000567843 GOLGA6L10A0A0M3HER8 536 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 E7ENX8 843 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SEMA7AO75326 666 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 AGFG2O95081 481 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 FKBP9O95302 570 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 IGHEP01854 428 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ALBP02768 609 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ALPPP05187 535 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ERGP11308 486 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 FBLP22087 321 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 GLRBP48167 497 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 CARSP49589 748 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SNRPNP63162 240 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 TAP2Q03519 686 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 OCA2Q04671 838 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 PRDX1Q06830 199 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 KLC1Q07866 573 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 AIMP2Q13155 320 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SYT16Q17RD7 645 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 MUM1Q2TAK8 710 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 BBS9Q3SYG4 887 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 RBM20Q5T481 1227 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 RNASEH2BQ5TBB1 312 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 YOD1Q5VVQ6 348 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 PRAMEF13Q5VWM6 474 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 MBOAT1Q6ZNC8 495 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 IGDCC3Q8IVU1 814 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SHISA5Q8N114 240 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ZADH2Q8N4Q0 377 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 OR11G2Q8NGC1 345 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ASB11Q8WXH4 323 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 KCNJ9Q92806 393 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 MIEF2Q96C03 454 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 MACROD1Q9BQ69 325 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 AARSD1Q9BTE6 412 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ILKAPQ9H0C8 392 aaPredicted RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 WDR54Q9H977 334 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 GRPEL1Q9HAV7 217 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 C5AR2Q9P296 337 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 TRPC4Q9UBN4 977 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 C3orf18Q9UK00 162 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 ADAMTS6Q9UKP5 1117 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 SNX12Q9UMY4 172 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 RUVBL1Q9Y265 456 aaKnown RBP11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 DHRS7Q9Y394 339 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
GTF3C1-208ENST00000567843 HIVEP3Q5T1R4 2406 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 A0A0A6YYC8 382 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 VSTM2BA6NLU5 285 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 H7BY64 318 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 I3L1I5 382 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 DNALI1O14645 258 aaPredicted RBP11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 HAT1O14929 419 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 P2RX6O15547 441 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 ZSCAN12O43309 604 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 ZBTB14O43829 449 aa11.64□□□□□ -0.55
GTF3C1-208ENST00000567843 VPS26AO75436 327 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms