RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 YBX1P67809 324 aaKnown RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 ABATP80404 500 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 PRDX1Q06830 199 aaKnown RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 CUL1Q13616 776 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 PRTGQ2VWP7 1150 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 TUBB8Q3ZCM7 444 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 PLEKHN1Q494U1 663 aaPredicted RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 PRR30Q53SZ7 412 aaPredicted RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 ICE2Q659A1 982 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 ZNF549Q6P9A3 640 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 PAQR7Q86WK9 346 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 GABPB2Q8TAK5 448 aaPredicted RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 COG1Q8WTW3 980 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 ASB11Q8WXH4 323 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 MVB12AQ96EY5 273 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 CABS1Q96KC9 395 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 ILKAPQ9H0C8 392 aaPredicted RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 MAP10Q9P2G4 905 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 ZNF282Q9UDV7 671 aaPredicted RBP19.25■□□□□ 0.67
CLN6-207ENST00000566347 TAC3Q9UHF0 121 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 FBXO5Q9UKT4 447 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 CDC14AQ9UNH5 594 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 MED16Q9Y2X0 877 aa19.25■□□□□ 0.67
CLN6-207ENST00000566347 CYSRT1A8MQ03 144 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 H0YGG7 62 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 GFYI3L273 518 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 MASP2O00187 686 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 EIF3FO00303 357 aaPredicted RBP19.24■□□□□ 0.67
CLN6-207ENST00000566347 PRPF4O43172 522 aaKnown RBP eCLIP19.24■□□□□ 0.674e-7■■■■■ 28.6
CLN6-207ENST00000566347 ZBTB14O43829 449 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 MED26O95402 600 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 GP1BBP13224 206 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 EZRP15311 586 aaKnown RBP19.24■□□□□ 0.67
CLN6-207ENST00000566347 ARF3P61204 181 aaPredicted RBP19.24■□□□□ 0.67
CLN6-207ENST00000566347 RELAQ04206 551 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 PTK6Q13882 451 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 PPP1R7Q15435 360 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 KIRREL2Q6UWL6 708 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 SHISA6Q6ZSJ9 500 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 AGGF1Q8N302 714 aaeCLIP19.24■□□□□ 0.67
CLN6-207ENST00000566347 SLC35F6Q8N357 371 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLN6-207ENST00000566347 STT3BQ8TCJ2 826 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 CD200R1Q8TD46 325 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 ZNF480Q8WV37 535 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 RERGQ96A58 199 aaPredicted RBP19.24■□□□□ 0.67
CLN6-207ENST00000566347 MIEF2Q96C03 454 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 C10orf90Q96M02 699 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 GPR21Q99679 349 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 CRB3Q9BUF7 120 aa19.24■□□□□ 0.67
CLN6-207ENST00000566347 SPTBN1Q01082 2364 aaKnown RBP19.24■□□□□ 0.67
CLN6-207ENST00000566347 DOCK10Q96BY6 2186 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 IGKV1-8A0A0C4DH67 115 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 E7ENX8 843 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 TXNDC9O14530 226 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 AGFG2O95081 481 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 SYF2O95926 243 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 F7P08709 466 aaPredicted RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 ZGLP1P0C6A0 271 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 PGAM1P18669 254 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 FBLP22087 321 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 SKIV2L2P42285 1042 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 TAP2Q03519 686 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 HSP90AA5PQ58FG0 334 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 RNASEH2BQ5TBB1 312 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 AGAP7PQ5VUJ5 663 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 GARNL3Q5VVW2 1013 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 ZNF425Q6IV72 752 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 LRRC8EQ6NSJ5 796 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 UGT3A1Q6NUS8 523 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 KCNMB4Q86W47 210 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 DTWD1Q8N5C7 304 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 CSNK1A1LQ8N752 337 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 AGAP4Q96P64 663 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 PSMG3-AS1Q96PY0 264 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 EBNA1BP2Q99848 306 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 AARSD1Q9BTE6 412 aaKnown RBP19.23■□□□□ 0.67
CLN6-207ENST00000566347 SNX12Q9UMY4 172 aa19.23■□□□□ 0.67
CLN6-207ENST00000566347 MDC1Q14676 2089 aaKnown RBP19.22■□□□□ 0.67
CLN6-207ENST00000566347 IGLV3-12A0A075B6K2 115 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 TCP11X1B4DZS4 312 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 SMAPO00193 183 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 HAUS5O94927 633 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 TTC4O95801 387 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 MPP1Q00013 466 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 KLC1Q07866 573 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 DSG2Q14126 1118 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 CYHR1Q6ZMK1 362 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 Q6ZS92 163 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 UBE2R2Q712K3 238 aaPredicted RBP19.22■□□□□ 0.67
CLN6-207ENST00000566347 PCGF5Q86SE9 256 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 CPNE9Q8IYJ1 553 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 PPFIBP2Q8ND30 876 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 OR11G2Q8NGC1 345 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 SNRNP40Q96DI7 357 aaKnown RBP19.22■□□□□ 0.67
CLN6-207ENST00000566347 OR2A5Q96R48 311 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 LHPPQ9H008 270 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 LRRC4CQ9HCJ2 640 aa19.22■□□□□ 0.67
CLN6-207ENST00000566347 IARS2Q9NSE4 1012 aaKnown RBP19.22■□□□□ 0.67
CLN6-207ENST00000566347 BLACEA4D250 179 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms