RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 E9PMD0 336 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 RIPK2O43353 540 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 GOLGA8HP0CJ92 632 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 MYBL1P10243 752 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 TFPIP10646 304 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 ACADMP11310 421 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 KRT13P13646 458 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 PORP16435 677 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 CPOXP36551 454 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 PPARGP37231 505 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SH3BGRP55822 239 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SORDQ00796 357 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 MYL7Q01449 175 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 DRAP1Q14919 205 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 MARCH8Q5T0T0 291 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 VWA5B1Q5TIE3 1220 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SFR1Q86XK3 245 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 CEP57Q86XR8 500 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 LINC00346Q8IVM7 164 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 LNX1Q8TBB1 728 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 CKAP2Q8WWK9 683 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 MAGEB18Q96M61 343 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 TTC25Q96NG3 672 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 AGPAT1Q99943 283 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SELENOSQ9BQE4 189 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 C8orf33Q9H7E9 229 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 ABI3Q9P2A4 366 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 SLC9A2Q9UBY0 812 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 DNAJC12Q9UKB3 198 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 A4GNTQ9UNA3 340 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 PACSIN2Q9UNF0 486 aaPredicted RBP4.12□□□□□ -1.75
LINC00561-201ENST00000565815 UBIAD1Q9Y5Z9 338 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 COL6A3P12111 3177 aa4.12□□□□□ -1.75
LINC00561-201ENST00000565815 MYH10P35580 1976 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DNAJC9-AS1A6NH13 148 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CDH16O75309 829 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DCTN3O75935 186 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 TMEM63AO94886 807 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GAS8O95995 478 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CYP1A2P05177 515 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DCNP07585 359 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 VIMP08670 466 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 TDGF1P13385 188 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CEACAM1P13688 526 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ETFAP13804 333 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 EPCAMP16422 314 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CHMP24386 653 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ALDH3A1P30838 453 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GTF2H1P32780 548 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 COILP38432 576 aaPredicted RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 RWDD2BP57060 319 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 HSF1Q00613 529 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 IL9RQ01113 521 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PPP2R5CQ13362 524 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PTK6Q13882 451 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SGO1Q5FBB7 561 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 WASHC2DQ5SRD0 308 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 B3GNT6Q6ZMB0 384 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SPATA21Q7Z572 469 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 FAM228AQ86W67 206 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CATSPER3Q86XQ3 398 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SLC13A5Q86YT5 568 aaPredicted RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 HACE1Q8IYU2 909 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 LRRC34Q8IZ02 419 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SPEM1Q8N4L4 309 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 HMGCLL1Q8TB92 370 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 DYDC1Q8WWB3 177 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 RND1Q92730 232 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 EEF2KMTQ96G04 330 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CCDC28BQ9BUN5 200 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 FAM49AQ9H0Q0 323 aaPredicted RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MUC13Q9H3R2 512 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ST6GALNAC4Q9H4F1 302 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 KLHL31Q9H511 634 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PARVGQ9HBI0 331 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 NKIRAS1Q9NYS0 192 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GDE1Q9NZC3 331 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 TBC1D7Q9P0N9 293 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 FETUBQ9UGM5 382 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GTF3C4Q9UKN8 822 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 A0A1B0GVT2 93 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 TRAFD1O14545 582 aaPredicted RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 SEC14L5O43304 696 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 MED24O75448 989 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 RHOBTB1O94844 696 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GCNT3O95395 438 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CERS1P27544 350 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CA8P35219 290 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 GCKP35557 465 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 AVPR1AP37288 418 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CETN2P41208 172 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 CXCL12P48061 93 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PEX5P50542 639 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 PLTPP55058 493 aa4.11□□□□□ -1.75
LINC00561-201ENST00000565815 NCALDP61601 193 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms