RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	HS3ST3B1	Q9Y662	390 aa		11.12	□□□□□ -0.63
KIFC3-222	ENST00000565481	IGLV3-12	A0A075B6K2	115 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481		H0YGG7	62 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MASP2	O00187	686 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	IPO13	O94829	963 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	HAUS5	O94927	633 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ALPP	P05187	535 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	PGAM1	P18669	254 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	IVD	P26440	423 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	VARS	P26640	1264 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	RPA3	P35244	121 aa	Predicted RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	OR1D4	P47884	311 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	UQCRFS1	P47985	274 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ARF3	P61204	181 aa	Predicted RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MPP1	Q00013	466 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	AIMP2	Q13155	320 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	CUL1	Q13616	776 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	RAPSN	Q13702	412 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	PTK6	Q13882	451 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	CRYM	Q14894	314 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MUM1	Q2TAK8	710 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	HSP90AA5P	Q58FG0	334 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ICE2	Q659A1	982 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	SUSD1	Q6UWL2	747 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	KIRREL2	Q6UWL6	708 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	SPNS2	Q8IVW8	549 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	EFCAB3	Q8N7B9	438 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MVB12A	Q96EY5	273 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	OR2A5	Q96R48	311 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	GPR21	Q99679	349 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	FAM167B	Q9BTA0	163 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	AARSD1	Q9BTE6	412 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ACAT2	Q9BWD1	397 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MFRP	Q9BY79	579 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	CCDC68	Q9H2F9	335 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	GRPEL1	Q9HAV7	217 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ZNF304	Q9HCX3	659 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MRPS30	Q9NP92	439 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ATP13A2	Q9NQ11	1180 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	SEMA3G	Q9NS98	782 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	TAC3	Q9UHF0	121 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	PCYOX1	Q9UHG3	505 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	FBXL4	Q9UKA2	621 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	MAD1L1	Q9Y6D9	718 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	ITPR2	Q14571	2701 aa		11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481	DIDO1	Q9BTC0	2240 aa	Known RBP	11.11	□□□□□ -0.63
KIFC3-222	ENST00000565481		A0A1W2PQ72	361 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	DNALI1	O14645	258 aa	Predicted RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	VPS26A	O75436	327 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	CCNDBP1	O95273	360 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	TTC4	O95801	387 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	ATXN8OS	P0DMR3	200 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	EZR	P15311	586 aa	Known RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	GABRB3	P28472	473 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	IMPA1	P29218	277 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	ABAT	P80404	500 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PPP1R7	Q15435	360 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PRR30	Q53SZ7	412 aa	Predicted RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	CRB2	Q5IJ48	1285 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PRAMEF13	Q5VWM6	474 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	IGFL2	Q6UWQ7	119 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	GALNT7	Q86SF2	657 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	KCNMB4	Q86W47	210 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	CNTN4	Q8IWV2	1026 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	CPNE9	Q8IYJ1	553 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	METTL27	Q8N6F8	245 aa	Predicted RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	OR11G2	Q8NGC1	345 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	STT3B	Q8TCJ2	826 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PSMG3-AS1	Q96PY0	264 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	EBNA1BP2	Q99848	306 aa	Known RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	NAT9	Q9BTE0	207 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	DDX47	Q9H0S4	455 aa	Known RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	SOX17	Q9H6I2	414 aa	Predicted RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	PLAC1	Q9HBJ0	212 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	SLAMF7	Q9NQ25	335 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	CDC23	Q9UJX2	597 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	RUVBL1	Q9Y265	456 aa	Known RBP	11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	B3GNT3	Q9Y2A9	372 aa		11.1	□□□□□ -0.63
KIFC3-222	ENST00000565481	NOTCH2	Q04721	2471 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	SMAP	O00193	183 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	ZBTB14	O43829	449 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	VPS4B	O75351	444 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	EIF2S1	P05198	315 aa	Known RBP	11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	ZGLP1	P0C6A0	271 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	ERVK-10	P10266	1014 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	TCP1	P17987	556 aa	Known RBP	11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	GNLY	P22749	145 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	CARS	P49589	748 aa	Known RBP	11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	KLC1	Q07866	573 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	DSG2	Q14126	1118 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	MSS51	Q4VC12	460 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	SPANXN3	Q5MJ09	141 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	GARNL3	Q5VVW2	1013 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481	LRRC8E	Q6NSJ5	796 aa		11.09	□□□□□ -0.63
KIFC3-222	ENST00000565481		Q6ZS92	163 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms