RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 E5RI56 91 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 BTN3A1O00481 513 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 CCL23P55773 120 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 KRR1Q13601 381 aaKnown RBP15.83■□□□□ 0.12
LINC00554-201ENST00000564841 INTS6LQ5JSJ4 861 aaKnown RBP15.83■□□□□ 0.12
LINC00554-201ENST00000564841 CLLU1OSQ5K130 101 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 LIMS2Q7Z4I7 341 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 ATAD1Q8NBU5 361 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 DBF4BQ8NFT6 615 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 OR5M11Q96RB7 305 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
LINC00554-201ENST00000564841 RAD18Q9NS91 495 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 POLHQ9Y253 713 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 RANBP2P49792 3224 aaKnown RBP15.83■□□□□ 0.12
LINC00554-201ENST00000564841 SMIM30A4D0T7 59 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HHLA1C9JL84 531 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 UROSP10746 265 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SLC2A4P14672 509 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 GLULP15104 373 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 RPL9P32969 192 aaKnown RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SLC10A7Q0GE19 358 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 FCHO2Q0JRZ9 810 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 ARHGEF6Q15052 776 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SGO1Q5FBB7 561 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 KDM4DQ6B0I6 523 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 P3H2Q8IVL5 708 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 LAX1Q8IWV1 398 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SLC13A3Q8WWT9 602 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 FAM124BQ9H5Z6 455 aaPredicted RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HMX1Q9NP08 348 aaPredicted RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 KRT84Q9NSB2 600 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 PCTPQ9UKL6 214 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 RALGAPA2Q2PPJ7 1873 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 PSMD3O43242 534 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 VPS4BO75351 444 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HAPLN1P10915 354 aaPredicted RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 PSKH1P11801 424 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 DNAJB2P25686 324 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HOXD10P28358 340 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HNF4AP41235 474 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HK3P52790 923 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 RPL38P63173 70 aaKnown RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SMARCB1Q12824 385 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 PTPRRQ15256 657 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 MAPKAPK3Q16644 382 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 BTBD16Q32M84 506 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SETMARQ53H47 684 aaPredicted RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 SHQ1Q6PI26 577 aaKnown RBP15.82■□□□□ 0.12
LINC00554-201ENST00000564841 CD300LGQ6UXG3 332 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 DEFB128Q7Z7B8 93 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 HORMAD1Q86X24 394 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 THEM5Q8N1Q8 247 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 METTL6Q8TCB7 284 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 BLOC1S5Q8TDH9 187 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 NTAN1Q96AB6 310 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 ABCB8Q9NUT2 735 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 KIF17Q9P2E2 1029 aa15.82■□□□□ 0.12
LINC00554-201ENST00000564841 LEUTXA8MZ59 168 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FFAR3O14843 346 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 GPR42O15529 346 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SEC22BO75396 215 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SLC2A3P11169 496 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 MLLT3P42568 568 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 VLDLRP98155 873 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 HMGCS1Q01581 520 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 SLC14A1Q13336 389 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ABRAXAS2Q15018 415 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF79Q15937 498 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZC3H12BQ5HYM0 836 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 TOR2AQ5JU69 321 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 MRPL10Q7Z7H8 261 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 MIB1Q86YT6 1006 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FBXL6Q8N531 539 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 LINC01599Q8WXQ3 324 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 KCTD13Q8WZ19 329 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 GGHQ92820 318 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FUBP1Q96AE4 644 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 PYURFQ96I23 114 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 NMUR1Q9HB89 426 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 EXOSC4Q9NPD3 245 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF490Q9ULM2 529 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 B8ZZF3 427 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 H3BUI4 141 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF623O75123 536 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FKBP9O95302 570 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RPS17P08708 135 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ITGA2P17301 1181 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 EFNA1P20827 205 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 DGKEP52429 567 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 CXCR4P61073 352 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FAPQ12884 760 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 DSC3Q14574 896 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 GPRIN3Q6ZVF9 776 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 ZNF551Q7Z340 670 aaPredicted RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RMDN1Q96DB5 314 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 RIPOR3Q96MK2 946 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 CCDC115Q96NT0 180 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 TSGA13Q96PP4 275 aa15.81■□□□□ 0.12
LINC00554-201ENST00000564841 FARSBQ9NSD9 589 aaKnown RBP15.81■□□□□ 0.12
LINC00554-201ENST00000564841 PCDHB5Q9Y5E4 795 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms