RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CHKBQ9Y259 395 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 KIAA1210Q9ULL0 1709 aa4.25□□□□□ -1.73
LINC00560-201ENST00000564593 A0A0G2JLW4 131 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 FLRT2O43155 660 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 DDHD2O94830 711 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 NGFP01138 241 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 C9P02748 559 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 APOHP02749 345 aaPredicted RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 DARSP14868 501 aaKnown RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 ITGA3P26006 1051 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 HERV-K104P61576 105 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CDR2Q01850 454 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CACNG1Q06432 222 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 SULT2A1Q06520 285 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 TRAP1Q12931 704 aaKnown RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 RBBP7Q16576 425 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 SUSD4Q5VX71 490 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CASC4Q6P4E1 433 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 C15orf39Q6ZRI6 1047 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 LINC00696Q6ZRV3 163 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 TUSC5Q8IXB3 177 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CCDC170Q8IYT3 715 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 SYCP3Q8IZU3 236 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CTCFLQ8NI51 663 aaPredicted RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 FIBINQ8TAL6 211 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 TSACCQ96A04 125 aaPredicted RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 AK8Q96MA6 479 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 UHRF2Q96PU4 802 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 UTP14AQ9BVJ6 771 aaKnown RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 FUT8Q9BYC5 575 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 MTMR12Q9C0I1 747 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 RSPH9Q9H1X1 276 aaPredicted RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 MMADHCQ9H3L0 296 aaPredicted RBP4.24□□□□□ -1.73
LINC00560-201ENST00000564593 SIX2Q9NPC8 291 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 KCNJ14Q9UNX9 436 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 WDR81Q562E7 1941 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 CECR2Q9BXF3 1484 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 IGSF1Q8N6C5 1336 aa4.24□□□□□ -1.73
LINC00560-201ENST00000564593 IGHV4-61A0A0C4DH41 118 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF197O14709 1029 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 DFFBO76075 338 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 IGHV4-59P01825 116 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 EDN1P05305 212 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 LHCGRP22888 699 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 KIAA1644Q3SXP7 199 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 CCDC158Q5M9N0 1113 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 LYSMD4Q5XG99 296 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 FAM166AQ6J272 317 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 CTR9Q6PD62 1173 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 IL17RELQ6ZVW7 336 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SLC16A9Q7RTY1 509 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 PIGZQ86VD9 579 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 CCDC63Q8NA47 563 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 OR10V1Q8NGI7 309 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SLC26A7Q8TE54 656 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 AFAP1L1Q8TED9 768 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 GRK7Q8WTQ7 553 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 P2RX5Q93086 422 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF524Q96C55 264 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 MAP3K3Q99759 626 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SHARPINQ9H0F6 387 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SDCBP2Q9H190 292 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 TMEM206Q9H813 350 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 TUFT1Q9NNX1 390 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 INTS9Q9NV88 658 aaKnown RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 WWOXQ9NZC7 414 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF624Q9P2J8 865 aaPredicted RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 LIPT1Q9Y234 373 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 R4GN57 208 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 IFITM10A6NMD0 228 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 PRSS44E7EML9 344 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 O00370 1275 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ZNF432O94892 652 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ANKRD34CP0C6C1 535 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 OAS2P29728 719 aaKnown RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ALDH4A1P30038 563 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ALDH1B1P30837 517 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 P2RY6Q15077 328 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SLC25A53Q5H9E4 307 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 IYDQ6PHW0 289 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 BTNL8Q6UX41 500 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SH2D5Q6ZV89 423 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 MARK2Q7KZI7 788 aaKnown RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 DCUN1D3Q8IWE4 304 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 KLHDC1Q8N7A1 406 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 GDAP1L1Q96MZ0 367 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 CDK19Q9BWU1 502 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 LSG1Q9H089 658 aaKnown RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 RIMS4Q9H426 269 aaPredicted RBP4.23□□□□□ -1.73
LINC00560-201ENST00000564593 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 ABCB8Q9NUT2 735 aa4.23□□□□□ -1.73
LINC00560-201ENST00000564593 PMS2P5A8MQ11 134 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 F8VVB4 439 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 F8VWA3 439 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 SLC33A1O00400 549 aaPredicted RBP4.22□□□□□ -1.73
LINC00560-201ENST00000564593 GP1BBP13224 206 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 TIMP3P35625 211 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 KCNJ10P78508 379 aa4.22□□□□□ -1.73
LINC00560-201ENST00000564593 FOLH1Q04609 750 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms