RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 FKTNO75072 461 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 CSTF2P33240 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 MANFP55145 182 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GALNT1Q10472 559 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF267Q14586 743 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 BTBD16Q32M84 506 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 UAP1L1Q3KQV9 507 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RAB42Q8N4Z0 105 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 C2orf73Q8N5S3 287 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 OR6Q1Q8NGQ2 317 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ZFP3Q96NJ6 502 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TEFMQ96QE5 360 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 POLR2J3Q9H1A7 115 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 TPT1P8Q9HAU6 139 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ANKHQ9HCJ1 492 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 DNAJC27Q9NZQ0 273 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 GTF2A1LQ9UNN4 478 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHB14Q9Y5E9 798 aa12.29□□□□□ -0.44
COMMD4-209ENST00000564068 OAS3Q9Y6K5 1087 aaKnown RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 ZFP37Q9Y6Q3 630 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-209ENST00000564068 C12orf71A8MTZ7 269 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 PIRO00625 290 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 STX16O14662 325 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 PAPSS2O95340 614 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 PLD1Q13393 1074 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 FAM214AQ32MH5 1076 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SNAP47Q5SQN1 464 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 C10orf62Q5T681 223 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SPATC1Q76KD6 591 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 ELMOD1Q8N336 334 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 OR5AK3PQ8NH89 298 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 RHOXF1Q8NHV9 184 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 TEX47Q8TBZ9 253 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 MYO19Q96H55 970 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SLC2A13Q96QE2 648 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 MROQ9BYG7 248 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 GPR83Q9NYM4 423 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHGA3Q9Y5H0 932 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 ERAL1O75616 437 aaKnown RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SMPD1P17405 629 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 DCDC1P59894 354 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 C18orf21Q32NC0 220 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 TBPL2Q6SJ96 375 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 NETO1Q8TDF5 533 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 REPS1Q96D71 796 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 L3HYPDHQ96EM0 354 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 WACQ9BTA9 647 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 MRM3Q9HC36 420 aaKnown RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 CD300AQ9UGN4 299 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 ALPLP05186 524 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 RPS3P23396 243 aaKnown RBP eCLIP12.28□□□□□ -0.449e-8■■■■□ 25.4
COMMD4-209ENST00000564068 IFNGR2P38484 337 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 RCAN2Q14206 197 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 COQ5Q5HYK3 327 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 SGCDQ92629 289 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 CRELD1Q96HD1 420 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
COMMD4-209ENST00000564068 NUFIP1Q9UHK0 495 aaKnown RBP12.28□□□□□ -0.44
COMMD4-209ENST00000564068 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.44
COMMD4-209ENST00000564068 A0A096LPI6 279 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 UGT2B17O75795 530 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 ALPIP09923 528 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 PRPS1L1P21108 318 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 C21orf33P30042 268 aaPredicted RBP12.27□□□□□ -0.44
COMMD4-209ENST00000564068 KDELR2P33947 212 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 SMIM11AP58511 58 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF33AQ06730 810 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 HKDC1Q2TB90 917 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 KANK2Q63ZY3 851 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 SLC37A3Q8NCC5 494 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 IMP4Q96G21 291 aaKnown RBP12.27□□□□□ -0.44
COMMD4-209ENST00000564068 IL12RB2Q99665 862 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 TTPALQ9BTX7 342 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 NFKBIZQ9BYH8 718 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 RBM38Q9H0Z9 239 aaKnown RBP12.27□□□□□ -0.44
COMMD4-209ENST00000564068 LTB4R2Q9NPC1 389 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 PRDM8Q9NQV8 689 aa12.27□□□□□ -0.44
COMMD4-209ENST00000564068 OR2AG2A6NM03 316 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 MANBAO00462 879 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 TLL1O43897 1013 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 APOL3O95236 402 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 PTTG1O95997 202 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 AKR1A1P14550 325 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 HNRNPFP52597 415 aaKnown RBP12.27□□□□□ -0.45
COMMD4-209ENST00000564068 ERVPABLB-1P60509 514 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 CSTF1Q05048 431 aaKnown RBP12.27□□□□□ -0.45
COMMD4-209ENST00000564068 GRIK2Q13002 908 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 NFE2L1Q14494 772 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 TEAD4Q15561 434 aa12.27□□□□□ -0.45
COMMD4-209ENST00000564068 TNFAIP8L2Q6P589 184 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms