RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 PANK2Q9BZ23 570 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 MTMR12Q9C0I1 747 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 GOLPH3LQ9H4A5 285 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 HEXA-AS1Q9H8Q6 139 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 Q9H8V8 135 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 PRMT7Q9NVM4 692 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 THAP10Q9P2Z0 257 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 ADD3Q9UEY8 706 aaKnown RBP2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 TBC1D29Q9UFV1 150 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 WDR83OSQ9Y284 106 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 ITIH6Q6UXX5 1313 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 A0A1W2PPQ1 181 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 KLLNB2CW77 178 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 O00370 1275 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 PHOX2AO14813 284 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 IPO8O15397 1037 aaKnown RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 POP4O95707 220 aaKnown RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ATP1B1P05026 303 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 MELTFP08582 738 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 DUX4L4P0CJ87 422 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 GP9P14770 177 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR3A2P47893 321 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZFP36L2P47974 494 aaKnown RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 VAMP7P51809 220 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 NAP1L1P55209 391 aaKnown RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 EPS8Q12929 822 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ITGA7Q13683 1181 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 VEZF1Q14119 521 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 WTAPQ15007 396 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 PTPN14Q15678 1187 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 RNF212Q495C1 297 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 GPR33Q49SQ1 333 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CBWD6Q4V339 395 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CBWD3Q5JTY5 395 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 GARNL3Q5VVW2 1013 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM205BPQ63HN1 556 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 PRR27Q6MZM9 219 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 LCLAT1Q6UWP7 414 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 C4orf50Q6ZRC1 276 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CHMP1BQ7LBR1 199 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ADGRA1Q86SQ6 560 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 MARCH9Q86YJ5 346 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 RPAP2Q8IXW5 612 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 TEX19Q8NA77 164 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR4K1Q8NGD4 311 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CFAP61Q8NHU2 1237 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 C9orf43Q8TAL5 461 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 NPRL2Q8WTW4 380 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 PRPF31Q8WWY3 499 aaKnown RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 TMCO6Q96DC7 493 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CALML4Q96GE6 196 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM71F1Q96KD3 344 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 TREX2Q9BQ50 279 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZMYND12Q9H0C1 365 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 PARLQ9H300 379 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 TUBB1Q9H4B7 451 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZHX3Q9H4I2 956 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 GIMAP4Q9NUV9 329 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 VPS28Q9UK41 221 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 RNF150Q9ULK6 438 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 CHKBQ9Y259 395 aa2.6□□□□□ -1.99
HMGB1P33-201ENST00000563485 IGHV4-30-2A0A087WSY4 118 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 TRBV4-1A0A0J9YWV2 114 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 hCG_1807616A0A1W2PRN6 198 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 A8MV72 311 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 NPIPB9F8W1W9 429 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 SNAP91O60641 907 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 LRCH4O75427 683 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 ERAL1O75616 437 aaKnown RBP2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 TSPAN9O75954 239 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 KRT33AO76009 404 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 RAB40ALP0C0E4 278 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 IRF2P14316 349 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 PFKFB1P16118 471 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 ALDH3A2P51648 485 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 FCHO2Q0JRZ9 810 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 TRIM29Q14134 588 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 EIPR1Q53HC9 387 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM198BQ6UWH4 519 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 TAGAPQ8N103 731 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR5T2Q8NGG2 359 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 SKA1Q96BD8 255 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 PTERQ96BW5 349 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 NSUN4Q96CB9 384 aaKnown RBP2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF597Q96LX8 424 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 SDF4Q9BRK5 362 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 GPN1Q9HCN4 374 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 BLOC1S4Q9NUP1 217 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 GDE1Q9NZC3 331 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 STYXL1Q9Y6J8 313 aa2.59□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 A0A1W2PPM1 405 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 GLOD5A6NK44 160 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 K7EQD1 137 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 LINGO3P0C6S8 592 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 ELAVL4P26378 380 aaKnown RBP2.58□□□□□ -2
HMGB1P33-201ENST00000563485 PIK3R1P27986 724 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 ZNF75DP51815 510 aa2.58□□□□□ -2
HMGB1P33-201ENST00000563485 DHODHQ02127 395 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms