RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 PMPCBO75439 489 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 ANXA9O76027 345 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 IPO13O94829 963 aaKnown RBP12.94□□□□□ -0.34
CLK3-206ENST00000562078 HMBSP08397 361 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 HTR1EP28566 365 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 RPS5P46782 204 aaKnown RBP12.94□□□□□ -0.34
CLK3-206ENST00000562078 DEFB103AP81534 67 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 DAB2P98082 770 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 CTBP1Q13363 440 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
CLK3-206ENST00000562078 RPS6KA2Q15349 733 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 MS4A13Q5J8X5 152 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 AFMIDQ63HM1 303 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 LETMD1Q6P1Q0 360 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 FUT10Q6P4F1 479 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 RSPO2Q6UXX9 243 aaPredicted RBP12.94□□□□□ -0.34
CLK3-206ENST00000562078 KDELC2Q7Z4H8 507 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
CLK3-206ENST00000562078 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 FBXO30Q8TB52 745 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 CCDC32Q9BV29 185 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 UGT2B28Q9BY64 529 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 RBM22Q9NW64 420 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLK3-206ENST00000562078 COMMD8Q9NX08 183 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 SCN3BQ9NY72 215 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
CLK3-206ENST00000562078 M0R082 166 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 PSMD3O43242 534 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 FAM20BO75063 409 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ATG13O75143 517 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TULP3O75386 442 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 SLC2A3P11169 496 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 STMN1P16949 149 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 PFKLP17858 780 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ETV6P41212 452 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 CTSKP43235 329 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 DIO3P55073 304 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 UBE3AQ05086 875 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TAF10Q12962 218 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 GALEQ14376 348 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TIGD7Q6NT04 549 aaPredicted RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 AHSA2Q719I0 299 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 KLHDC8BQ8IXV7 354 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ZBTB44Q8NCP5 570 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 OR8H1Q8NGG4 311 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TESCQ96BS2 214 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 CEP19Q96LK0 163 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 SLC30A2Q9BRI3 323 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 OR51E2Q9H255 320 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TMEFF2Q9UIK5 374 aaPredicted RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 SCML1Q9UN30 329 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ANKRD36A6QL64 1941 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 SLC16A6O15403 523 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 PI15O43692 258 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 SH3BP5O60239 455 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 SERPINI2O75830 405 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 VNN2O95498 520 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 C1RP00736 705 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TNNI3P19429 210 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 MYL9P24844 172 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 CDH13P55290 713 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 EEFSECP57772 596 aaKnown RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 ALFQ53S48 1182 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 LIX1LQ8IVB5 337 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 PHC2Q8IXK0 858 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 TCTE3Q8IZS6 198 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ANKRD53Q8N9V6 530 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 ATXN3LQ9H3M9 355 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 GSTO2Q9H4Y5 243 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 FARSBQ9NSD9 589 aaKnown RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 ZNF224Q9NZL3 707 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 CCDC59Q9P031 241 aaKnown RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 MARCH2Q9P0N8 246 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 DNAJB9Q9UBS3 223 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
CLK3-206ENST00000562078 DNAJC15Q9Y5T4 150 aa12.93□□□□□ -0.34
CLK3-206ENST00000562078 FAM95CA0A1B0GW59 222 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 A0A1W2PP18 115 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 OR5K4A6NMS3 321 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 CSF2P04141 144 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 ACADMP11310 421 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 PRIM2P49643 509 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 GEMP55040 296 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 TAS2R39P59534 338 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
CLK3-206ENST00000562078 MVKQ03426 396 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 ELAVL2Q12926 359 aaKnown RBP12.92□□□□□ -0.34
CLK3-206ENST00000562078 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 OTOP2Q7RTS6 562 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 CIR1Q86X95 450 aaPredicted RBP12.92□□□□□ -0.34
CLK3-206ENST00000562078 LURAP1LQ8IV03 231 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 ZNF683Q8IZ20 524 aa12.92□□□□□ -0.34
CLK3-206ENST00000562078 UBE2J2Q8N2K1 259 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms