RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FGF11Q92914 225 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 OR4K3Q96R72 315 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 CAPS2Q9BXY5 557 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 ALG9Q9H6U8 611 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 CNOT10Q9H9A5 744 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 APMAPQ9HDC9 416 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC6A20Q9NP91 592 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MRPS30Q9NP92 439 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM184CQ9NVA4 438 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF358Q9NW07 568 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SOHLH2Q9NX45 425 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 NUDT4Q9NZJ9 180 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TBK1Q9UHD2 729 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 DCDC2Q9UHG0 476 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SERTAD3Q9UJW9 196 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 RARRES3Q9UL19 164 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 TMCO1Q9UM00 188 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 PCDHB3Q9Y5E6 796 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
RABGGTA-221ENST00000561055 SCN2AQ99250 2005 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 NUP210LQ5VU65 1888 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 KCNE1BA0A087WTH5 132 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 A0A1W2PPM1 405 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 HCRTR1O43613 425 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 CTSVO60911 334 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 DLGAP3O95886 979 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 MT-ND3P03897 115 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 SBK3P0C264 359 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 EZRP15311 586 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 GCGRP47871 477 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 FOXM1Q08050 763 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 GPR19Q15760 415 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 THEMIS2Q5TEJ8 643 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 FOXR1Q6PIV2 292 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 CROCCP2Q86T23 111 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 THOC6Q86W42 341 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 C17orf64Q86WR6 236 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 PROSER1Q86XN7 944 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 OR2W6PQ8NHA6 318 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 PMEPA1Q969W9 287 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 PYCR2Q96C36 320 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 LRFN5Q96NI6 719 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 EGFL8Q99944 293 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 MRPL57Q9BQC6 102 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 TMEM79Q9BSE2 394 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 ACAT2Q9BWD1 397 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 UNKQ9C0B0 810 aaKnown RBP9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 KLHL25Q9H0H3 589 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 FANCEQ9HB96 536 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 MKS1Q9NXB0 559 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 GPRC5BQ9NZH0 403 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 CD274Q9NZQ7 290 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 FOXJ2Q9P0K8 574 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 COPG2Q9UBF2 871 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 PLCL2Q9UPR0 1127 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC22A14Q9Y267 594 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 KLHL20Q9Y2M5 609 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 KCNE2Q9Y6J6 123 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 IGF2RP11717 2491 aa9.24□□□□□ -0.93
RABGGTA-221ENST00000561055 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 H7BY64 318 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 UBXN8O00124 270 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TLX3O43711 291 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 STK16O75716 305 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 S100BP04271 92 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 PYGBP11216 843 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 GNAZP19086 355 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 SLCO1A2P46721 670 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 EMP3P54852 163 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ALDH18A1P54886 795 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ITGA1P56199 1179 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 PCBP4P57723 403 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 CSNK1G2P78368 415 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 SLC18A2Q05940 514 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 IFFO1Q0D2I5 559 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 PCBP2Q15366 365 aaKnown RBP eCLIP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TNFAIP8L3Q5GJ75 292 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TCTE1Q5JU00 501 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 YOD1Q5VVQ6 348 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 PWWP2BQ6NUJ5 590 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TLDC1Q6P9B6 456 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF517Q6ZMY9 492 aaPredicted RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TRABD2AQ86V40 505 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 MCATQ8IVS2 390 aaKnown RBP9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 ZNF248Q8NDW4 579 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 MYRIPQ8NFW9 859 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 OR1L3Q8NH93 324 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 NEIL2Q969S2 332 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 THAP11Q96EK4 314 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 WDR34Q96EX3 536 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 MED8Q96G25 268 aa9.23□□□□□ -0.93
RABGGTA-221ENST00000561055 TSNARE1Q96NA8 513 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms